Protein

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Genbank accession
YP_009850607.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MPSILISQPFAAAGDKSAVPTTDPNGKVNLTQGYTPDYEIDLNAGDPKAKPVERAVQNWLFYMLSLNQQSWQKQGFCEWFSSMPGGYPKNAIVIRQRSDGFFYPYISLVANNVSDPLTSTTQWAYIQNTRELISNIPMPSGGPDGSAAEVIATGVDFNTKFNGTWEVASDSVASGCQNLPPDGNGVRRAGMLESKTWNTAPNQITLQRYTITDGTMFVRSILNGVVGTWSRVLGEKDFMRFSKGLTLATNTQLGADSVGAFVRWQPSSPTNGQINLPPRSSVAPGQTISFINQSASSTLTVLGASGETIMRPDANTTTNLLIQPGDTAYFVASETPSRWDLFGGSATLNYAQSFVQTQATADNSKRIASTAFVWNVAKTRADPSSNFAARMSPARILTGSDVPTTPGIWSAEGSGYTPHGYGSLLVTTNRNDLSVPLTGNNAPGSYVQMIFVGHGTSRMWHRIVVDGNPAKDSGWIQELTTAGGDVTNINVTGAFAANAGIEIGNVSGTANSPFIDFHTGGSASATDYDARIWSPSGSNSIMLRPFNVSASKFGRVIVEGAGNHQLQFAVGYVTGSVDRGMLINNFGNGTRLNVIDFSVIGADGSIKNALMTIEGDGNATNTAKFTVWGSIQTQSNIHIGGAAFQTDGNVRGSVWGGGYLLSWLNANVITQMRLGGVSRMPNYNGGEAMCDSGQVTVGVGDFGADDGYGYQRPLQFQRPNDSTWYNIVSI
Physico‐chemical
properties
protein length:730 AA
molecular weight: 77819,67990 Da
isoelectric point:5,63709
aromaticity:0,09452
hydropathy:-0,22260

Domains

Domains [InterPro]
DC_0930
STR
1–710
DC_0930
cd19958
STR
148–232
cd19958 G3DSA:6.20.70.20
YP_009850607.1
1 730
Architecture
STR
STR 1-710 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009850607.1
1 730
Domain Start End Length (AA) Confidence
N-terminal 1 234 234 0,8353
Central domain 235 433 200 0,1466
C-terminal 434 730 296 0,7763
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-234
Central
235-433
C-terminal
434-730

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage MyoSmar
[NCBI] 		2596673 Uroviricota > Caudoviricetes > Lindbergviridae > Myosmarvirus myosmar >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009850607.1 [NCBI]
Genbank nucleotide accession
NC_048800.1 [NCBI]
CDS location
range 33184 -> 35376
strand -
CDS
ATGCCATCAATATTAATTAGCCAGCCGTTCGCTGCTGCTGGTGATAAAAGCGCGGTGCCAACAACAGATCCAAATGGCAAGGTGAACTTGACTCAGGGCTACACGCCTGATTATGAGATCGACCTTAACGCAGGTGATCCAAAGGCAAAGCCTGTTGAGCGCGCCGTTCAAAACTGGCTTTTCTACATGCTGTCTTTGAACCAACAATCCTGGCAGAAACAAGGTTTCTGTGAATGGTTCTCTTCCATGCCAGGTGGATACCCTAAAAACGCAATCGTTATTCGCCAGAGATCAGATGGATTCTTCTATCCATATATCTCTCTTGTGGCCAACAACGTATCAGATCCGCTGACATCCACCACCCAATGGGCATATATTCAGAACACAAGGGAGTTGATATCAAATATCCCGATGCCATCGGGTGGCCCAGACGGTTCGGCGGCAGAGGTGATTGCAACGGGAGTTGACTTCAACACCAAGTTCAACGGGACTTGGGAGGTTGCCAGTGATTCAGTTGCGTCTGGGTGCCAAAACCTGCCGCCTGATGGCAATGGCGTTCGCCGCGCTGGCATGCTTGAGTCGAAAACTTGGAACACGGCGCCAAACCAAATCACCCTTCAGCGATACACCATCACTGACGGGACGATGTTTGTTCGTTCTATTTTGAATGGTGTTGTTGGCACTTGGAGCAGGGTTCTTGGTGAAAAGGACTTTATGCGCTTCTCCAAAGGGCTTACCTTGGCCACCAATACTCAACTTGGGGCTGATAGCGTCGGCGCATTTGTCCGTTGGCAACCAAGCTCTCCGACCAACGGACAGATCAATCTTCCACCAAGGTCGTCGGTTGCACCAGGCCAAACAATCAGCTTCATCAACCAGTCAGCATCAAGTACGTTGACAGTTTTAGGCGCATCCGGCGAGACTATCATGAGGCCAGATGCGAATACCACCACAAACCTGCTGATACAACCAGGTGACACAGCATATTTCGTGGCATCAGAGACGCCATCAAGATGGGATTTATTCGGCGGCTCTGCGACACTTAATTATGCGCAGTCGTTCGTACAAACACAGGCAACTGCCGACAACTCCAAACGCATTGCTAGCACAGCATTCGTTTGGAACGTGGCAAAAACAAGGGCTGATCCATCAAGTAACTTTGCAGCTAGAATGTCGCCGGCAAGGATTCTAACTGGGTCAGACGTTCCAACAACGCCTGGGATTTGGTCGGCAGAAGGCTCTGGATATACGCCACACGGATATGGCTCGCTTTTAGTTACGACCAACCGGAATGACCTTTCAGTTCCTTTGACAGGCAACAACGCACCTGGCTCTTACGTTCAAATGATATTTGTTGGCCATGGGACATCTCGGATGTGGCACAGAATCGTTGTCGATGGCAATCCTGCAAAAGACAGCGGCTGGATTCAAGAGCTGACGACTGCTGGCGGAGACGTGACCAATATCAACGTCACCGGGGCTTTCGCCGCAAACGCTGGCATTGAGATAGGGAACGTGTCTGGCACGGCTAATTCGCCATTCATCGACTTCCACACAGGCGGCTCTGCGTCAGCAACCGATTATGACGCAAGAATCTGGTCACCTTCCGGCTCAAACAGCATCATGTTAAGGCCATTTAACGTTAGTGCAAGCAAATTCGGCAGGGTCATTGTTGAAGGCGCAGGGAATCACCAACTTCAATTCGCGGTAGGCTACGTCACAGGATCAGTTGATCGTGGCATGCTCATCAACAACTTTGGGAACGGAACCAGACTAAATGTGATTGACTTCTCAGTCATCGGCGCTGACGGATCAATCAAGAATGCACTGATGACCATTGAAGGTGATGGTAATGCAACCAATACCGCCAAATTCACGGTCTGGGGTTCCATCCAAACGCAATCGAACATACACATAGGTGGGGCAGCGTTCCAGACAGATGGCAACGTCCGTGGCTCTGTCTGGGGTGGCGGATATCTTTTGTCATGGCTTAACGCGAATGTAATCACCCAGATGCGACTCGGCGGCGTATCACGAATGCCTAATTACAATGGCGGTGAGGCGATGTGCGACTCAGGACAGGTCACCGTTGGCGTTGGCGACTTTGGCGCTGATGACGGTTATGGATACCAGAGGCCGCTGCAATTCCAAAGGCCAAATGACTCAACCTGGTACAACATAGTTTCAATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a7a1b6528556b05b359d59ea505a99c2258156bb7722481a285c29a3523be28
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7239
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50