Protein

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Genbank accession
WCX68684.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSFFAGKYTDGKTVLSLNRASGGDINVHYSPNTNSIFHSDMPHMFVKRRFQVGLGNAGNGYFTGALPSDLSYLLANRANVILPVLVVRDNADGTEYYHQMTGIQRNSTYRWRNLYENISIWGQYTGSIQFDLNLEWGYWKQGGAVWDQIGNYGTGGHIIFDHEGGEDYVADAYYDLAGGWIMYQWRDPQDWYMYTNWIPRAQSRPIMNYEDSQNLVNPDYMHPLGPSSSVYDAVYVRAGGARCATGMGDPNSYGNTAYTKYRDLDFPYQIPMANSSSAYMTAGAERHVANGRMSGFSEVYYPFTPVRMEYLWLNVTFDNYWGYSAENLFTGNDIKIAKDSFIIKGVDLRNTNYEMLAAVSTGTPSISNTYFSSNVFAWSSTEMDDGGAFRFFGANVWGGLKGFTGSNTGSTVGNSTPWNIGLYRLPQNSNIEINSPQNKIAINGVDIWSPNVRPLQLFTQNKANNIILGDNGRLYPMAYGETRLINTVDVGLGGSPEPSTILLSIEWMGNSLCDTDGDVNMQRIGNNAASGAGSGPYVGAARRLTKYDYDAGDGVSHQIVVLHTNTFVPILTTNTISYAGGAAGAPRNKFQYYIRKNASNILEFWVTSRALPMSGLPVSYTPWVQYHKLRLNIQRLT
Physico‐chemical
properties
protein length:637 AA
molecular weight: 70925,25280 Da
isoelectric point:6,01569
aromaticity:0,13501
hydropathy:-0,36389

Domains

Domains [InterPro]
IPR059609
RBD
1–637
IPR059609
WCX68684.1
1 637
Architecture
RBD
RBD 1-637
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCX68684.1
1 637
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0130
Central domain 11 452 443 0,9016
C-terminal 453 637 184 0,9332
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-452
C-terminal
453-637

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GSW6
[NCBI] 		3025422 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus GSW6
Host Salmonella enterica subsp. enterica serovar Infantis
[NCBI] 		595 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCX68684.1 [NCBI]
Genbank nucleotide accession
OQ362005 [NCBI]
CDS location
range 53008 -> 54921
strand -
CDS
ATGAGCTTCTTCGCAGGAAAATATACAGATGGAAAAACAGTCCTATCTTTAAATAGGGCTAGTGGAGGAGACATCAACGTTCATTACAGTCCCAACACAAACTCCATCTTCCATTCAGACATGCCACACATGTTTGTTAAACGCCGTTTTCAGGTGGGTTTAGGGAACGCAGGTAACGGATACTTTACTGGAGCCTTACCATCCGACCTCAGCTATCTTCTAGCAAATAGGGCAAACGTGATTCTTCCAGTCCTAGTGGTGCGAGATAATGCTGATGGTACTGAGTACTACCACCAGATGACAGGTATTCAGAGGAACAGCACGTATAGATGGCGTAACCTTTATGAGAATATTAGTATCTGGGGTCAATACACTGGATCTATTCAATTTGACTTGAACCTTGAATGGGGTTACTGGAAACAGGGTGGTGCTGTCTGGGATCAGATTGGTAACTACGGTACTGGTGGGCATATTATATTCGACCATGAAGGTGGTGAAGACTACGTTGCTGATGCTTACTATGACCTGGCAGGTGGTTGGATTATGTATCAATGGCGTGATCCACAGGATTGGTATATGTATACTAACTGGATACCACGTGCTCAATCCCGTCCTATCATGAACTATGAGGATAGCCAGAACTTAGTAAACCCCGATTATATGCACCCCCTTGGACCTTCTAGCAGTGTTTACGATGCTGTGTATGTTAGAGCGGGTGGTGCTAGATGTGCTACTGGTATGGGTGACCCAAACTCCTACGGTAATACAGCCTATACTAAGTATAGAGATCTTGATTTCCCTTACCAGATTCCAATGGCTAACTCTAGTTCTGCATACATGACTGCTGGTGCAGAGCGTCATGTTGCTAATGGGCGTATGTCTGGATTTAGTGAAGTTTACTACCCATTTACCCCAGTTCGTATGGAATATCTATGGTTGAATGTTACGTTTGATAACTACTGGGGTTACTCAGCTGAAAACCTATTTACTGGTAATGACATTAAGATTGCAAAAGATTCCTTTATAATTAAGGGAGTTGATTTAAGAAATACCAACTATGAAATGTTGGCAGCTGTTAGTACCGGTACTCCTAGTATTAGTAATACTTACTTCTCTAGTAACGTGTTTGCCTGGTCATCTACAGAAATGGATGATGGTGGTGCTTTCAGATTCTTTGGTGCTAATGTCTGGGGTGGTTTGAAAGGATTTACTGGAAGCAATACAGGTAGTACAGTTGGTAATTCAACTCCATGGAACATTGGGTTGTATAGACTTCCACAGAATAGTAATATCGAGATTAACTCTCCACAGAATAAGATAGCTATTAACGGTGTTGATATCTGGAGTCCTAATGTAAGACCTCTACAGTTATTTACTCAGAATAAAGCTAATAATATTATTCTCGGAGATAATGGTAGACTGTATCCTATGGCATACGGTGAAACCAGATTAATAAACACAGTTGATGTTGGTTTAGGTGGTAGTCCAGAACCTTCTACGATTCTCCTAAGTATTGAATGGATGGGTAACTCTCTATGTGATACTGATGGTGACGTAAACATGCAGCGTATTGGTAACAATGCTGCTAGTGGTGCAGGTAGTGGCCCTTATGTTGGTGCTGCTAGACGTTTGACTAAGTATGACTACGACGCTGGTGATGGTGTTTCTCACCAAATCGTAGTATTACATACAAATACCTTTGTACCTATTCTAACTACTAATACTATTTCATATGCTGGAGGTGCAGCTGGTGCTCCTCGAAATAAATTCCAGTACTATATCAGAAAGAACGCTTCCAATATCCTAGAGTTCTGGGTAACTTCTAGAGCATTGCCAATGAGCGGTCTGCCTGTTTCATATACTCCGTGGGTTCAATACCACAAACTAAGACTTAATATTCAGAGGTTAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a449d3484955dc10da755d45ee8c69d65808a87e95e917c412cb4cd2f0abdf8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2447
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50