Protein

View in Explore
Genbank accession
XHH73340.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MDLSNLENALNNGDFKEQVYSSLEGIYQISKILNQLEILDNFNEHDLKIVETIQTIKSKLAGYENSEQELKAKIDALVSAIEAKRQELEARLNLELQNARISEIAKLNEAGETLKTNLITELTQAKNNLASELEKLKTATQNLLNTPRMQGVNMKFVGFYVYGLQSFFKNESDEFKELFEFSSIVLKSNKSYIVQFSMPYELKTNGIYSDSMGEMVLCLKANSKAYPILNSFYQNKNVNLTRDHKLIETYIVNCIFKTPSEKADYKIAVFTRKHNDLWINVNYTSNTEGFETNYLNKAKFANYTTLSIPTEYNNGWVFYKHSQALVYEILE
Physico‐chemical
properties
protein length:331 AA
molecular weight: 38112,76760 Da
isoelectric point:5,51011
aromaticity:0,10876
hydropathy:-0,41692

Domains

Domains [InterPro]
DC_0415
STR
1–331
DC_0415
G3DSA:1.20.120.20
STR
31–148
G3DSA:1.20.120.20
Coil
Unmapped
53–98
Coil Coil
XHH73340.1
1 331
Architecture
STR
STR 1-331
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11061_1
[NCBI] 		3331670 Viruses > unclassified bacterial viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73340.1 [NCBI]
Genbank nucleotide accession
PQ159895.1 [NCBI]
CDS location
range 28207 -> 29202
strand +
CDS
ATGGATTTATCCAATTTAGAAAACGCCTTGAATAACGGCGATTTCAAAGAACAGGTATATAGCAGTTTAGAGGGGATTTATCAAATTTCTAAGATTTTGAACCAGTTAGAGATTTTAGATAACTTTAACGAACACGATTTGAAAATCGTAGAAACGATCCAAACGATTAAAAGCAAGTTAGCGGGCTATGAAAACAGCGAGCAGGAACTAAAGGCTAAAATTGACGCTTTAGTGAGCGCCATAGAAGCTAAAAGGCAAGAATTAGAAGCGCGCTTGAATTTAGAATTACAAAACGCTAGGATTAGCGAAATAGCAAAACTAAACGAAGCAGGAGAGACGCTAAAAACAAACCTTATAACTGAATTAACGCAAGCTAAAAATAATCTAGCGAGCGAATTAGAAAAGTTGAAAACAGCCACGCAAAACCTACTAAACACGCCAAGAATGCAAGGCGTGAATATGAAGTTTGTGGGGTTTTATGTTTATGGGCTTCAAAGTTTTTTCAAAAATGAAAGCGATGAATTTAAGGAATTGTTTGAATTTTCTAGTATTGTGCTAAAAAGCAATAAAAGCTATATCGTGCAATTTAGCATGCCTTATGAGTTAAAAACGAACGGTATTTACAGCGATAGTATGGGCGAAATGGTGCTATGCTTGAAAGCTAATTCTAAAGCCTATCCGATCCTTAATAGCTTTTATCAAAACAAAAACGTTAATTTGACCCGAGATCACAAACTGATAGAGACTTATATAGTTAATTGCATTTTCAAAACGCCAAGCGAAAAAGCCGACTACAAAATAGCGGTATTTACACGAAAACATAATGATTTATGGATAAATGTTAATTACACTTCTAACACGGAAGGGTTTGAAACGAACTATTTGAATAAAGCCAAATTCGCTAACTACACCACGCTAAGCATTCCAACAGAATATAATAACGGCTGGGTGTTTTATAAGCATTCTCAAGCGTTAGTTTATGAAATTTTAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
af7320835ff56a48a62e44c59dc2184195d1c58581326e07ec7704613407fda7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank