Protein

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Genbank accession
GENB_c1045d73a933 [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDVQTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWLGFDRKGNTFLLPLYSNNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEAMSYSPVIVSTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDVPLNIRNNNISIDFPLARITKRLNFSDVYKVEWDIIPTASSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34383,39340 Da
isoelectric point:5,14969
aromaticity:0,13378
hydropathy:-0,23177

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
GENB_c1045d73a933
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_c1045d73a933
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,6104
Central domain 288 288 2 0,6692
C-terminal 289 299 10 0,5845
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-288
C-terminal
289-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K45
[NCBI] 		3027632 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OQ291061.1_CDS_[complement(94073..94972)] [NCBI]
Genbank nucleotide accession
OQ291061.1 [NCBI]
CDS location
range 94073 -> 94972
strand -
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
6f42333d87cdd3c8c756475ee9fd995696271ffbd6af35f59c4b938590877e7c

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,8368
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50