Protein

View in Explore
Genbank accession
WGJ78323.1 [GenBank]
Protein name
tail collar protein
RBP type
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MPRKVFNNGDILYAEDVNTIGLPFVDGQDLLGHGLKIEDDSLSDDPEQLKARFYSWYNRFKVTINSGLILSVTQGVISVSGNIISFPPQTINAINNSTSYVWIGKTDIDPTITLRVSTELPDVSIALARVIAASGSITSVTDLRDVAVDILPPSIPDAVPVGSTIVSLLPPARPAPTGYIELLENPQNISRVTYSALFAEYGTYYGAGDGSTTFTIPGTSGRYIRLGKTGLAVGGIGGNDQITIPANSIPAHQHAIPATTHTHGVTDGTHSHGVSQSPHSHGVSDPGHAHGVPFGAADDDGSTAFDTGGIPYNNGVGTTLNQTGVSISGSNANISINGATSNITIQSASTGLTATNNTGSGAAFTHEQPYLVFRVFVKF
Physico‐chemical
properties
protein length:379 AA
molecular weight: 39541,40070 Da
isoelectric point:5,20289
aromaticity:0,07124
hydropathy:-0,04565

Domains

Domains [InterPro]
DC_0891
STR
20–379
DC_0891
IPR037053
ATT
152–219
IPR037053
SSF88874
STR
158–277
SSF88874
IPR011083
ATT
176–223
IPR011083
WGJ78323.1
1 379
Architecture
STR
ATT
STR
STR 20-151 | ATT 152-223 | STR 224-379
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dolichospermum phage Dfl-Yong418-1
[NCBI] 		3038320 Viruses >
Host Dolichospermum flos-aquae
[NCBI] 		1166 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGJ78323.1 [NCBI]
Genbank nucleotide accession
OQ560326 [NCBI]
CDS location
range 61188 -> 62327
strand -
CDS
ATGCCAAGAAAAGTTTTTAATAATGGTGATATTTTATACGCGGAAGATGTTAATACTATAGGTTTACCGTTTGTTGATGGTCAAGACTTATTAGGACACGGTTTAAAGATAGAAGATGATAGTCTATCTGATGATCCAGAACAACTTAAAGCGCGTTTTTATTCTTGGTATAACCGATTTAAAGTTACTATAAATTCCGGTTTAATTCTATCAGTAACTCAAGGTGTAATATCAGTATCAGGTAACATTATCAGTTTTCCACCTCAAACAATTAATGCGATCAATAATTCTACAAGTTATGTTTGGATAGGCAAAACAGACATAGATCCTACAATCACTTTGAGGGTTTCTACAGAATTACCAGATGTTTCTATAGCTTTAGCGCGAGTAATTGCCGCTAGTGGTTCTATAACATCGGTTACAGATTTACGTGATGTTGCTGTTGATATTTTACCGCCATCCATACCCGATGCTGTTCCGGTCGGTTCTACTATCGTTTCTTTGTTGCCTCCTGCAAGACCAGCGCCAACGGGTTACATAGAGTTACTAGAAAACCCTCAAAATATTTCTAGGGTGACATATAGCGCTTTATTTGCTGAATATGGCACTTATTACGGTGCGGGTGATGGTTCAACTACTTTCACCATTCCTGGCACTTCTGGAAGATATATAAGACTGGGTAAAACGGGTTTAGCTGTTGGCGGTATTGGAGGTAATGATCAAATAACTATACCTGCCAACTCTATACCAGCACACCAGCACGCTATACCAGCAACTACACATACTCATGGTGTTACAGATGGTACACATTCTCATGGTGTTTCACAATCACCTCATAGTCATGGTGTTAGTGATCCTGGTCATGCTCATGGTGTCCCGTTTGGTGCGGCCGATGATGATGGATCAACCGCTTTCGACACCGGGGGAATTCCGTATAATAACGGGGTAGGAACCACGTTAAATCAAACAGGTGTAAGTATATCAGGATCTAATGCAAACATATCCATAAATGGTGCTACATCCAACATAACAATACAAAGCGCTTCAACAGGATTGACAGCAACTAATAACACTGGTAGCGGTGCAGCTTTTACACATGAACAACCATATTTAGTTTTTCGTGTGTTTGTCAAGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0fd08c542cfbb86e5836c811df3273a1e9e861773628f84e890a0df93690d2db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7207
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50