Protein

View in Explore
Genbank accession
USN16838.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGKVSGSYGSVVRGVSEQVPQDRRPGQHFEQINMISDPVRGLARRHGSLLQDEKQIRAFDQGIWDAMVADTARHKEFTFFVDGVEYALIHRTTASPTPEVTGLSFAWCFNKDARKFIPIVYASNDPGLEQLRSGGVSAAVNVGRYIYLAGNNIVPRWTPNSKFDNTTNKSKMAFWVRGGTYSTKFSATLSRADGTKVTATYKTKPSSYPGLLDTSDLSSSDPDYQKKVLDRTNAYNSAVTAWIGEAAEDSTPENIANKLAAQFTSQGVSGVSVINSTVVVDNAQFVEASGDDGGDGTLMRAVGNEVTALDLVSTVHWGGKVVKVRPKKNNGEDAFYLQAELKEGSGPWGEVSWKETAGYEMKPVEVFVQGTVVGGTLYLASTAAKLTEIAGGVHPDYKANVVGDDISCPLPYFFGKSIDYLGMFQDRLVIGSGATLFFSRPGDYFNWFRTSVLTVDDRDPIEMYALGSEDDTIKTSTTYDRNILLFGKRMQYTVNGRQPLTPKSASIVILSAHEDAIDADPQNSGNFVFYGKWRNGVSSLHQIQMGMLADSPESFNVSQQLDQYLQGKPVQIVALTSPNTVVLRTDASRNTLYTYTYLDTPAGSERLFDAWSKWTWDETLGVVTALARHDGDILSFTIRKGVDRTGANRIWIAADRFVLDTQISDLPYADSLRPATAALSPGPDAFINPASTQFDDVGVAVFNRGHQYGFLGSTFGKLDEFTEQYGMDALPSMTVGVMYPSCVTPTNPYVLDRNEKAIVNGRLTLGRIGVSVTDTGGMTCDVETANGTSRTLNFNGRLLGRISDLIGRQPIVTTSVNATIGKEVRECKYTLGAKTWLPLTITAIEWTGQFFNNARRV
Physico‐chemical
properties
protein length:857 AA
molecular weight: 93713,01930 Da
isoelectric point:5,66607
aromaticity:0,09918
hydropathy:-0,27071

Domains

Domains [InterPro]
IPR058003
TTP
1–48
IPR058003 IPR058003
DC_0058
STR
1–857
DC_0058
USN16838.1
1 857
Architecture
STR
STR 1-857
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USN16838.1
1 857
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,8889
Central domain 162 360 200 0,3514
C-terminal 361 857 496 0,2382
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-360
C-terminal
361-857

Taxonomy

  Name Taxonomy ID Lineage
Phage Brevundimonas phage vB_BpoS-Babayka
[NCBI] 		2948596 Uroviricota > Caudoviricetes > Autographivirales > Conareevirus > Conareevirus babayka
Host Brevundimonas pondensis
[NCBI] 		2774189 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USN16838.1 [NCBI]
Genbank nucleotide accession
ON529868 [NCBI]
CDS location
range 26168 -> 28741
strand -
CDS
ATGGGCAAAGTCTCTGGTTCCTACGGTAGCGTAGTCCGAGGGGTGTCGGAGCAGGTCCCACAGGACCGTCGCCCCGGCCAACACTTCGAGCAGATCAACATGATCTCGGACCCCGTGCGCGGCCTCGCTCGCCGCCACGGGAGCCTCCTTCAAGACGAGAAGCAAATCCGCGCGTTCGACCAAGGTATTTGGGACGCAATGGTCGCGGACACCGCTCGTCACAAGGAGTTCACTTTCTTCGTGGATGGCGTCGAATACGCCCTGATCCACCGCACCACCGCGTCCCCGACGCCCGAGGTCACTGGCCTCAGCTTCGCATGGTGCTTCAACAAAGACGCGCGCAAGTTCATCCCTATCGTTTACGCCAGCAATGATCCCGGCCTTGAGCAACTGCGCTCGGGCGGCGTGTCCGCTGCCGTCAACGTGGGGCGCTACATCTACCTCGCGGGTAACAACATCGTCCCGCGCTGGACGCCGAACTCCAAGTTCGACAACACGACCAACAAGAGCAAGATGGCCTTTTGGGTCCGTGGCGGCACCTACTCGACCAAGTTCAGCGCAACGCTGTCTCGGGCGGATGGCACCAAGGTCACGGCTACCTACAAGACGAAGCCCTCGTCCTACCCCGGCCTGCTGGATACGTCGGACTTGTCCTCTTCGGACCCCGACTACCAGAAGAAAGTGCTGGACCGCACCAACGCCTACAACTCGGCGGTGACTGCGTGGATCGGTGAAGCAGCCGAGGACAGCACCCCGGAGAACATCGCCAACAAGCTGGCAGCGCAGTTTACCTCCCAAGGCGTTAGCGGCGTGTCCGTGATTAACTCCACGGTGGTCGTTGACAATGCCCAGTTCGTTGAAGCCTCTGGCGACGACGGCGGGGACGGAACGCTCATGCGGGCTGTCGGCAACGAAGTCACGGCTCTGGACCTTGTGTCCACCGTCCACTGGGGCGGCAAGGTCGTCAAGGTGCGACCCAAGAAGAACAACGGCGAGGACGCCTTCTACCTGCAAGCTGAACTCAAGGAGGGCTCTGGCCCTTGGGGTGAGGTCAGTTGGAAGGAAACCGCAGGCTACGAAATGAAGCCCGTGGAAGTCTTCGTTCAGGGCACCGTTGTGGGCGGGACGCTTTACCTAGCATCTACGGCAGCTAAGCTGACCGAGATTGCAGGTGGGGTTCACCCCGATTACAAGGCCAACGTGGTGGGCGACGACATTAGCTGCCCGCTGCCCTATTTCTTCGGCAAGAGCATCGACTACCTTGGCATGTTCCAAGACCGTCTGGTGATCGGCTCAGGGGCCACCCTGTTCTTCTCGCGGCCCGGTGACTACTTCAACTGGTTCCGCACGTCTGTCCTCACGGTGGACGACAGGGACCCGATTGAAATGTATGCCCTCGGCTCCGAGGACGATACGATCAAGACCTCGACCACCTACGACCGGAACATTCTGCTGTTCGGCAAGCGTATGCAATACACCGTCAACGGGCGGCAACCGCTTACGCCTAAGAGCGCCAGTATCGTCATCCTGTCCGCACACGAGGACGCCATCGACGCTGACCCGCAGAACAGCGGGAACTTCGTGTTCTACGGCAAGTGGCGCAACGGGGTGTCCAGCCTCCATCAAATCCAGATGGGTATGCTGGCCGACAGCCCGGAAAGCTTCAACGTCTCGCAGCAACTGGACCAATACCTGCAAGGGAAGCCGGTTCAGATCGTGGCGCTGACCTCGCCTAACACAGTGGTCCTCCGCACGGACGCAAGCCGCAATACGCTCTACACCTACACCTACCTCGACACGCCTGCGGGCAGCGAGCGTCTGTTCGACGCTTGGTCTAAGTGGACGTGGGACGAGACGCTGGGCGTGGTCACGGCTCTGGCCCGGCACGACGGGGACATTCTGTCCTTCACCATCCGCAAGGGTGTGGACCGGACGGGAGCCAACCGCATCTGGATCGCGGCTGACCGCTTCGTGCTGGACACGCAGATTTCGGACCTGCCCTACGCGGACAGTCTGAGGCCCGCTACGGCGGCGCTGAGCCCCGGCCCGGACGCCTTCATCAACCCGGCCTCGACGCAGTTCGATGACGTGGGTGTGGCGGTGTTCAACAGGGGCCACCAATACGGCTTCTTGGGCTCTACGTTCGGCAAGCTGGACGAGTTCACCGAGCAATACGGTATGGACGCCCTTCCGTCTATGACGGTCGGTGTCATGTATCCTAGCTGCGTCACCCCGACGAACCCCTACGTTCTCGACAGGAACGAGAAGGCCATCGTTAACGGGCGGCTCACGCTGGGACGCATCGGCGTGTCCGTGACTGACACGGGCGGCATGACCTGTGACGTGGAGACTGCGAACGGGACTTCACGAACGCTGAACTTCAACGGCAGGCTGCTGGGGCGTATCTCCGACCTGATCGGGCGACAGCCCATCGTCACTACCTCCGTCAACGCCACTATCGGCAAGGAGGTCCGCGAGTGCAAATACACTCTCGGGGCTAAGACTTGGCTACCCCTGACCATTACAGCAATCGAGTGGACTGGTCAGTTCTTCAACAACGCACGGAGGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4400e5f91dfe1e5d484fcdfc918bc3d2cab22906b3ebb348013c51ef5eb4877a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3038
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50