Protein

View in Explore
Genbank accession
AUR84465.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
Protein sequence
MKKLLILVALLTFSSSAFAMPAAVIGVVVALGASAAGVTVATAIAIGMAAASFYMASNVKVPSSSKSQSELKQLLRSSRAAKQVVYGKGFFSGAMIYAEEQEGDKESDDGTYAEYLYMAVGMCNHPVEQVHNIYLNETDIGEFDQIVDYKFHNNPTTVDQYLVDNSPSWKSDMIGKGTSWLRLGMKFDRDKFANGVPTPRVELSGENRIWDPRTDSIGYTDNAALVIADYMIRYRGYTRDRIITQGFGSFIDAANLCDENVTNPDGSVNDRYTINGLFTMDEKPGQVLDDMLTACGGQLVRIGGKIGLLPAAYYGPATFTITSSDLLDDNSVQIQPEPSYGDSVNTIKGTFIDPSQNYVETDYPTVSDANALVRDGGELATDLNFRFVTNPYQAQRLADIELRRSISGGSVVIKTNLRGLYARLGRVIKLDIKELGVIGEYRVVNAANHVMNGVELSLMRDSIDIYDDATGKPFVPPPLTNLPTGGIAPPTGVQFLVESIGEVVQGQIQWQINAPQYASNDIRIKKTSNNKIIQVGSSIGNTYKINGLPANNYTVEVRTVDMRGAVSTWASASFVVDIPNPPSSVTVNRSNWNLELIPNITGGVPTGTLFEFWYLADDASYIKDAPTYGEGDRLRAIKIFTGSSFNHGGRTPDRWHHYWIRSVSVYGQSDYTYVQTGTTREQDLVTTVVERLEAIEVQSANWTPDANTGISQYGYKLFSPASGHVTLPDGTVLENSDGLAVFQDAVVNGHITAKSLTFINDAAIPPEIDNKNVKKVDNLITDAGFSAEFVDGVPQCAPNKYAPNSEKFTAWARGADWALDSTNYTGSITSNRVNESGNKYATAYSDPIYVEQGTRVLFSVYLGYHRLSGAGVQLTLVHKDGTESHLNQFSADLSKLGGKTLDGYDRLSIAVNVDSTIVSVKWAVLKGNTLATESDSWLFYVKPMLEIVAAGVTEPSSWQDGAPPPYNDSWIYPDQSSLQIKSSNYASGVRGWAIDADGNAEFYNAHIRGQLYAQDIVGDIVSGITKKNSPVTKSITTYYPTFDRSSSFGYIEVKNSRSWSRTLIFTVRIQIDEQSGGAYGAGVVRLFVDGSNGGNDIRSREYWGAQKESDALRKYVMGVDVTMVVHVPANTKPRFTLYVEGARKAGRSYQFNAGISSPSTNDIWGGYLVTNGGDLS
Physico‐chemical
properties
protein length:1176 AA
molecular weight: 128274,90120 Da
isoelectric point:5,14412
aromaticity:0,09949
hydropathy:-0,24337

Domains

Domains [InterPro]
DC_0187
STR
1–852
DC_0187 DC_1439
IPR053171
Unmapped
469–680
IPR053171
IPR057587
ATT
581–685
IPR057587
AUR84465.1
1 1176
Architecture
STR
ATT
STR
RBD
STR 1-580 | ATT 581-685 | STR 686-852 | RBD 973-1176
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR84465.1
1 1176
Domain Start End Length (AA) Confidence
N-terminal 1 916 916 0,6633
Central domain 917 1115 200 0,1379
C-terminal 1116 1176 60 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-916
Central
917-1115
C-terminal
1116-1176

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.056.O._10N.261.48.C11
[NCBI] 		1881305 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR84465.1 [NCBI]
Genbank nucleotide accession
MG592436.1 [NCBI]
CDS location
range 19895 -> 23425
strand +
CDS
ATGAAAAAGTTGTTGATTCTAGTAGCGTTACTAACATTCTCATCGTCAGCATTTGCTATGCCAGCTGCTGTAATCGGTGTAGTTGTGGCTCTAGGCGCTAGTGCAGCAGGTGTGACAGTGGCTACCGCTATCGCTATCGGTATGGCCGCTGCGTCGTTCTACATGGCGTCAAATGTAAAAGTCCCTAGTTCGTCAAAATCTCAGTCAGAGCTTAAGCAGTTGTTACGTAGCTCACGTGCAGCTAAGCAGGTGGTTTACGGTAAAGGTTTCTTCTCCGGTGCAATGATATACGCTGAAGAACAAGAGGGTGACAAGGAAAGTGATGACGGCACATACGCTGAATACCTGTACATGGCTGTAGGCATGTGTAATCACCCGGTTGAACAGGTTCATAACATCTACTTGAATGAGACTGACATCGGTGAGTTTGACCAAATTGTTGACTACAAATTCCACAATAACCCAACCACAGTTGACCAATACTTAGTTGACAACTCTCCATCGTGGAAGAGTGACATGATAGGTAAAGGCACCTCATGGTTGAGATTAGGTATGAAGTTTGACCGTGACAAGTTCGCTAACGGTGTACCGACTCCACGTGTTGAACTGTCAGGTGAGAACAGAATATGGGACCCTCGTACAGACTCAATTGGTTACACTGACAATGCTGCTCTCGTTATTGCCGACTACATGATTCGATACCGTGGTTACACTCGTGACCGCATCATCACCCAAGGTTTCGGTTCATTCATTGACGCTGCTAACTTATGTGATGAGAACGTGACTAACCCTGACGGCAGTGTCAATGACCGCTACACCATCAACGGTCTGTTCACTATGGACGAGAAACCTGGTCAAGTGCTTGATGACATGCTTACCGCGTGTGGTGGTCAACTTGTTCGTATCGGTGGGAAGATAGGTTTACTCCCTGCTGCTTACTACGGTCCAGCTACTTTCACTATCACTAGCTCAGACTTACTTGACGACAACAGTGTGCAGATTCAACCGGAACCAAGTTACGGTGACTCAGTTAACACCATTAAAGGTACGTTCATCGACCCTAGTCAAAACTACGTTGAGACTGACTACCCGACTGTGTCTGATGCTAACGCCTTGGTTCGTGACGGTGGTGAACTTGCTACTGACCTTAACTTCCGTTTTGTGACTAACCCGTATCAAGCTCAACGTCTCGCTGACATCGAGTTACGTCGTTCTATTAGCGGTGGCTCAGTAGTTATCAAAACCAACCTGAGAGGCTTATACGCTCGTTTAGGTCGTGTAATCAAGCTTGACATCAAAGAGTTAGGTGTCATCGGTGAGTACCGTGTCGTCAATGCGGCCAACCATGTTATGAACGGTGTAGAGTTGTCGTTGATGCGTGACTCAATCGACATCTACGATGACGCTACAGGTAAACCGTTTGTACCACCTCCACTAACTAACTTGCCTACGGGTGGTATCGCTCCTCCGACAGGTGTTCAATTCTTGGTTGAGTCAATCGGTGAAGTCGTTCAAGGTCAGATTCAATGGCAAATAAACGCACCTCAGTACGCATCTAACGACATCAGAATTAAGAAGACGTCTAACAATAAGATAATCCAGGTTGGCAGCTCTATCGGTAATACCTACAAGATTAACGGTCTACCTGCTAACAACTACACTGTTGAGGTACGCACCGTTGACATGAGAGGTGCTGTGTCTACGTGGGCTTCAGCAAGCTTCGTTGTAGACATACCTAACCCACCATCGTCGGTGACAGTGAATCGCTCAAACTGGAACCTTGAGCTAATCCCTAATATCACTGGCGGTGTCCCTACAGGTACTCTATTCGAGTTCTGGTACTTGGCTGATGATGCCAGTTACATCAAGGATGCTCCGACATACGGTGAGGGTGATAGACTTAGAGCCATTAAGATATTTACCGGGTCGAGCTTTAACCATGGTGGACGTACGCCGGATAGATGGCACCACTACTGGATTCGCAGTGTAAGCGTGTACGGTCAGTCTGATTACACTTACGTGCAAACGGGTACAACAAGAGAGCAGGACTTAGTTACGACAGTGGTTGAGCGTCTTGAGGCAATCGAGGTTCAATCAGCCAACTGGACACCTGACGCTAACACTGGTATCAGTCAGTACGGTTACAAACTGTTCTCACCTGCTAGTGGTCATGTAACCCTACCTGACGGTACTGTTCTGGAAAACTCTGATGGCTTAGCAGTGTTCCAAGATGCCGTGGTTAACGGTCACATCACAGCAAAGTCTTTGACGTTCATTAATGACGCAGCGATACCACCTGAAATTGACAATAAGAATGTTAAAAAAGTAGACAACCTAATCACTGACGCAGGGTTTTCAGCTGAGTTTGTAGACGGTGTCCCACAGTGTGCGCCAAACAAGTATGCCCCTAACAGTGAAAAGTTTACTGCTTGGGCAAGGGGGGCTGACTGGGCTTTAGATAGTACCAACTACACTGGTTCAATAACAAGTAATAGAGTTAATGAGAGTGGTAACAAATATGCCACAGCTTACAGTGACCCAATATACGTAGAACAGGGGACGCGCGTCTTATTCAGTGTATATTTGGGATATCACAGGTTAAGTGGTGCAGGTGTCCAGTTAACACTGGTGCATAAGGATGGTACAGAATCGCACCTAAACCAATTCTCGGCAGACCTATCGAAACTCGGAGGTAAAACCCTTGACGGATATGACAGGTTGAGTATTGCCGTCAATGTAGACTCGACTATAGTCTCAGTTAAATGGGCTGTACTTAAAGGTAACACGTTGGCTACAGAATCTGACTCATGGCTTTTCTACGTTAAACCGATGCTTGAGATTGTTGCAGCAGGAGTCACAGAACCTAGTAGTTGGCAAGACGGTGCCCCTCCACCTTACAATGATAGTTGGATTTACCCTGACCAAAGCTCTCTACAGATTAAATCAAGTAACTATGCGTCAGGTGTACGTGGTTGGGCGATAGATGCTGACGGTAACGCTGAATTCTACAATGCTCACATACGTGGTCAACTTTACGCTCAAGACATTGTCGGTGACATTGTTTCAGGTATAACTAAGAAAAACTCACCAGTAACTAAATCAATAACCACTTACTACCCCACCTTTGATCGCTCGTCTTCATTCGGTTACATTGAAGTGAAGAACTCTAGGTCATGGAGTAGAACTCTTATATTCACCGTCAGAATCCAGATTGACGAGCAGTCAGGTGGAGCTTACGGTGCAGGTGTAGTGAGATTGTTCGTTGATGGTAGTAATGGTGGTAATGACATTCGTTCACGTGAATATTGGGGCGCTCAAAAAGAGTCCGATGCATTAAGGAAGTACGTGATGGGTGTAGATGTGACCATGGTCGTACATGTACCTGCTAACACAAAACCAAGATTTACACTTTACGTAGAGGGTGCACGTAAAGCAGGTAGGAGCTATCAATTTAACGCTGGAATAAGTTCACCTTCAACCAATGATATTTGGGGCGGTTACTTAGTGACTAACGGTGGTGACTTAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
df5310e7e4ae3a201056c838a5ab88b72d2efa8c20366139d9f1176a1abd194b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7051
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank