Protein

View in Explore
Genbank accession
QVG64122.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADVLVTGIKIGDMPLKGTVSGNEKLPTGDVGDLAVTPNQIKDFTIAEGNLVSQEQLDDAVESLEQTSSGIAGRVQTLEDRTSNVNNTADLDKPVSNATQAALNEKADKVDVDAKLDLKADKDKVVSSFNGQVGEVILNQSDLVELGEDFSTTPIFQDVPKLTNPDGSSIPEFDSQIQPLVNSLAVHRQGLTPTFDQDFANKIGGYPLNARLMLDNGDIVQSTIANNVNNPNVDMAGWVKTNSASQIFDESGLSQQAINDSSKRLNSNVLDYFTKSELESWKSDPNTFDASDAIIRAQTLSSGAEINFPSGVFRITKKIPSTKSWRGVRGGYAKRGTHIIVDNPVAIDGVIDCSMAHMAVELHDIQFEDKQRLLHTLLIEGVYQGFYSGIRVDRFKLGIQTSGTYIYFEKCYFVANGVGIRPTPTDAVADAQSTMFGCRECFFIYNDIGYDISGVSAADDLINVPFISCGFELNRIGLNSPNRTWYLTLLNCWFEANSDYGLYAPTSHLIEINTRHNANSPFVVSPTESTKIFGMTASFVDLEIKGDIKFPAEYSSTGAAAKGKTISQTFTDDGGGVVAEIAFVREQNSNIYGGSGIEFSTAISTTSPDLIPRWGVNQFGVLYPKQDVLYNIGAPTKRCKAVFTASIMYTETCGDFAGSGSPEGVVVATKGSTYRRVDGGSPSFYVKESDVGSSGWVAK
Physico‐chemical
properties
protein length:699 AA
molecular weight: 75594,51000 Da
isoelectric point:4,70294
aromaticity:0,08727
hydropathy:-0,22031

Domains

Domains [InterPro]
DC_0704
ATT
1–338
DC_0704 DC_2009
IPR011050
STR
286–517
IPR011050
IPR011050
STR
286–505
IPR011050
QVG64122.1
1 699
Architecture
ATT
STR
RBD
ATT 1-338 | STR 339-517 | RBD 655-699
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVG64122.1
1 699
Domain Start End Length (AA) Confidence
N-terminal 1 291 291 0,9932
Central domain 292 546 256 0,9778
C-terminal 547 699 152 0,9636
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-291
Central
292-546
C-terminal
547-699

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage Herod
[NCBI] 		2801402 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVG64122.1 [NCBI]
Genbank nucleotide accession
MW316732.1 [NCBI]
CDS location
range 21001 -> 23100
strand +
CDS
ATGGCTGATGTATTAGTCACAGGTATTAAAATTGGGGATATGCCCCTTAAGGGAACTGTTTCAGGAAATGAAAAGTTACCTACTGGAGATGTAGGAGATTTAGCTGTTACTCCTAATCAAATTAAAGACTTCACCATTGCAGAGGGAAATCTTGTAAGTCAAGAACAGTTGGATGATGCTGTAGAATCCTTAGAGCAGACCTCTTCTGGGATTGCTGGTAGAGTACAGACGCTTGAAGATAGAACTTCCAATGTCAACAATACGGCTGACTTGGATAAACCTGTCAGCAACGCCACACAAGCTGCTTTAAATGAGAAAGCTGATAAGGTAGATGTAGACGCAAAATTAGATCTTAAAGCTGACAAAGATAAAGTAGTTTCTTCTTTTAATGGTCAGGTTGGGGAAGTTATATTAAATCAATCTGATTTAGTTGAACTAGGCGAAGATTTCAGTACAACACCGATATTCCAAGATGTTCCTAAACTGACAAATCCAGATGGTAGTTCTATACCAGAATTTGACTCACAGATTCAACCATTAGTAAATAGTTTAGCAGTCCATAGACAGGGATTAACCCCGACATTTGATCAAGATTTTGCCAATAAAATTGGTGGCTATCCATTAAATGCTCGTTTGATGCTTGATAATGGCGATATTGTTCAATCAACAATTGCTAACAATGTCAATAATCCAAATGTTGATATGGCAGGGTGGGTTAAAACCAATTCTGCAAGTCAAATTTTTGATGAAAGCGGATTAAGTCAACAAGCAATTAATGATTCTAGTAAACGGTTGAATAGTAATGTCCTTGATTATTTTACAAAGTCAGAACTAGAGTCGTGGAAATCAGACCCTAACACCTTTGATGCATCCGACGCAATCATTCGAGCGCAGACTCTTTCTTCGGGTGCAGAGATTAACTTCCCAAGTGGGGTATTCCGCATTACTAAGAAAATCCCAAGTACAAAGTCTTGGAGAGGTGTACGTGGAGGTTACGCAAAACGGGGGACACATATCATCGTTGATAACCCCGTTGCAATTGATGGTGTTATTGACTGTAGCATGGCGCATATGGCAGTTGAGTTGCACGATATTCAATTTGAGGATAAGCAAAGATTACTACATACACTTTTGATTGAGGGTGTGTATCAAGGGTTTTATTCTGGAATACGTGTAGACCGCTTCAAATTAGGTATTCAAACGTCAGGTACGTATATTTATTTTGAAAAATGTTACTTCGTAGCCAATGGTGTAGGGATTCGACCAACTCCCACAGATGCGGTAGCAGATGCTCAATCTACAATGTTTGGGTGCAGAGAGTGTTTCTTTATTTATAATGATATTGGTTACGATATTTCAGGTGTTAGTGCTGCTGATGACTTAATTAATGTCCCGTTTATTTCATGTGGGTTTGAGTTGAACCGTATCGGTTTAAACTCTCCAAATAGGACGTGGTATCTGACGTTGTTAAACTGTTGGTTTGAAGCCAACTCTGATTATGGTCTGTATGCTCCAACAAGTCACCTTATTGAGATTAATACACGCCATAATGCAAACAGCCCGTTTGTTGTCAGCCCAACAGAGTCAACTAAAATTTTTGGCATGACTGCAAGTTTTGTTGATTTAGAAATCAAAGGCGATATTAAGTTCCCTGCCGAATACTCATCAACAGGTGCAGCAGCCAAAGGGAAAACAATATCACAAACATTCACAGATGATGGAGGTGGTGTTGTTGCTGAAATAGCTTTTGTGCGTGAGCAGAATTCAAATATTTATGGTGGTTCAGGTATTGAATTTTCAACAGCTATCTCAACTACAAGTCCTGATCTTATCCCCCGTTGGGGGGTTAACCAGTTTGGAGTATTGTACCCCAAACAAGATGTTCTTTATAATATTGGAGCACCGACAAAGCGTTGCAAGGCAGTATTTACCGCTTCAATCATGTACACAGAAACGTGTGGTGACTTTGCCGGTTCTGGTAGTCCAGAAGGGGTTGTTGTTGCTACCAAGGGATCAACCTACAGAAGGGTAGATGGTGGTTCTCCTTCTTTTTATGTAAAAGAATCCGATGTAGGTTCATCTGGGTGGGTTGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ca4394d9d5afde55368c8711a9e10d6759c6892ca987fabcb5246738d05a4df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7083
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50