Protein

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Genbank accession
YP_010080539.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTIFKAYCWNPNTGRDFTIKKPNWNIVQRCSLKSIETLQFLPQHIYLLDGTTGSETSKRLQRKKCPDDWNRPFSYGSVITKPQEENKISGIAFCTDYERKQRSNLYPNFVTPNLTQGQKYGLSGTLYNPGINVLEVRLKLLYGTKNELVGTYQVQPNQYLDVKEIYTLPSTETVEKFGIAFEVAQTSDFVQFEVYLPKIEQGGEVTPFVEDRDEFYSYQKTNADDGTPPFTGIYEGTPPQSTDYKVYTWTGSKTNKELFYLEERGICKQEVVWCYSRPLNQRVLIGIDSDTYDTEAGRTIKFHVLNGNKGIFDLTGSVIYPEQFTDKRQTFDSDTKAWADNQEPLYVTDANTAIDCTFGEMASNIIEGYHYQQADKRYRVDELLRSAMVNTGYNMGSYWADWWFDSYANEMRASYGIENCKVSEKIHYSSMNEWTGSVSFPTGVVLAPYKPKLNETDTKKLKGVSSATSIWGIGVLRTERSTEDWFREYEDSRTRPVPTQILFANYNTKKAWLFQQQTNGTWSKSGEFTIPGSATAFARAWGIIPKNGELKGNVIMTDKNYVDFPANARPITLGVEALFPVIKYNEVKFNPQMYATAYDTKLFWWGQKANVSNLTYGECGVRSVDFMTGLCAIERVYK
Physico‐chemical
properties
protein length:638 AA
molecular weight: 73080,26130 Da
isoelectric point:5,89980
aromaticity:0,13636
hydropathy:-0,56082

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage 20R03M
[NCBI] 		2500815 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010080539.1 [NCBI]
Genbank nucleotide accession
NC_054991.1 [NCBI]
CDS location
range 17434 -> 19350
strand +
CDS
ATGACTATTTTCAAGGCGTATTGCTGGAATCCTAACACAGGTAGAGATTTCACAATCAAAAAACCTAATTGGAACATTGTACAACGTTGTTCTTTGAAGAGTATCGAAACACTTCAATTTTTGCCACAACACATCTATTTGTTAGACGGAACGACAGGTTCAGAAACAAGCAAGCGTTTGCAAAGAAAGAAATGTCCTGACGACTGGAATAGACCTTTTAGCTATGGTTCTGTCATCACTAAACCACAAGAAGAGAATAAAATAAGTGGTATTGCTTTTTGTACAGATTATGAAAGAAAACAACGTTCTAATTTATATCCTAACTTTGTAACACCTAATCTTACGCAAGGACAAAAATACGGCTTGTCAGGTACTTTATACAATCCAGGTATAAATGTACTAGAGGTACGGTTAAAATTGTTATACGGTACCAAAAATGAGCTTGTAGGTACATACCAAGTTCAACCTAATCAATACTTAGATGTAAAAGAAATTTACACGCTACCTAGTACGGAAACGGTTGAAAAGTTTGGTATAGCTTTTGAAGTTGCACAGACAAGCGATTTTGTACAATTTGAAGTGTATTTGCCTAAAATTGAACAAGGTGGAGAGGTTACTCCGTTTGTTGAGGATAGAGATGAATTTTATAGCTATCAAAAAACTAACGCAGATGACGGAACGCCGCCGTTTACTGGGATTTATGAGGGTACACCACCACAAAGTACCGATTATAAAGTTTATACTTGGACAGGTTCCAAAACTAATAAAGAGCTTTTTTACTTAGAAGAAAGAGGAATTTGCAAACAAGAAGTCGTTTGGTGCTATAGTCGCCCCCTTAATCAACGTGTATTGATTGGAATTGATTCAGACACTTATGACACCGAAGCAGGTAGAACGATCAAATTTCATGTTTTGAACGGAAATAAGGGCATATTTGATTTGACTGGTAGCGTCATCTATCCTGAACAGTTCACAGATAAACGTCAAACTTTTGATAGCGATACAAAGGCATGGGCAGATAACCAAGAACCGTTATACGTTACTGACGCAAATACTGCAATTGATTGTACTTTCGGAGAAATGGCAAGTAATATCATAGAGGGGTATCATTACCAACAAGCTGATAAACGTTACAGAGTAGATGAACTACTTCGTTCGGCGATGGTTAATACAGGCTACAACATGGGTTCTTATTGGGCTGATTGGTGGTTTGATAGCTACGCGAATGAAATGCGTGCAAGTTATGGCATCGAGAATTGTAAGGTTAGTGAAAAAATACATTATAGTTCTATGAATGAATGGACTGGAAGTGTGTCTTTTCCTACTGGTGTTGTTTTAGCACCTTATAAACCAAAACTAAACGAAACGGACACTAAAAAACTTAAAGGGGTTTCTAGTGCAACAAGTATTTGGGGTATTGGTGTATTAAGAACAGAGCGAAGTACAGAAGATTGGTTTAGAGAATACGAAGATTCAAGAACCAGACCAGTACCAACGCAAATTCTTTTTGCTAACTATAACACTAAAAAAGCATGGTTATTTCAACAACAAACCAACGGAACGTGGAGCAAAAGTGGAGAATTCACGATACCAGGAAGTGCCACGGCATTCGCTAGAGCTTGGGGTATTATACCAAAAAATGGAGAATTGAAAGGTAATGTTATCATGACAGATAAGAATTACGTTGATTTTCCTGCAAACGCTAGACCGATAACGCTAGGAGTGGAAGCACTGTTCCCAGTTATCAAGTATAACGAAGTTAAGTTTAACCCTCAAATGTACGCAACTGCTTACGATACCAAGCTATTTTGGTGGGGACAAAAGGCGAACGTAAGCAACTTAACTTATGGGGAGTGTGGGGTTCGTTCGGTTGATTTTATGACTGGTTTATGTGCAATAGAAAGGGTATATAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c76a6c670c5e10d34b75569f71950a9a9128104f8564458dc9aed343fe390d7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4869
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whey sample dairy phages Hayes,S. 1985-06-01 — GenBank