Protein

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Genbank accession
AXY86126.1 [GenBank]
Protein name
putative colanic acid-degrading protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGGRSKLFSELGGAPLNTYQHDNQTLDIRELENQQKVLDETLAETIGNVNELQQTAGQSMYILGNYASGMVIENDRQYVRYDNLLYYWTGPVPFTTTGNFYEESYWTGGVQSGIEWSYEVQEDGEFEFNIPYSFTNVRLFVGGVRLTRVEDYTIDVINRKITLTKVKLSKGVLVTAELNSRDALSVTQDRIDSLTREISEKVGFVNYKLTDLSEGQSLTLTTRVQTVSFSVNGEYYKWDGVLPKVVNYGDPEPSQSEQGTGKWIPVGSGALKSELMTAGETTGAAIVYLRYGGTVADGIRYITPEMARAKGDGTTDDTAALRSAVTLAKTYGLKLMGMGTYKISNQSVDISGVVIENLTIVGTGASSQLLVNGDTDITKLNLSKCGIRHINGIFKLDQFEINDCSATAALLCQQLAANSQLFVTNGIMRRCNYGYLRQGSPASSKPLTATLLQNLQFFDMKSDPIEINLAVADTNTRIDNITVDNVDATSTGNANWGIAIGLAGTGNYSLTAPDSEYMSDVVISNVKVKGAKQCIHMEKCRNITIRDIEIYPDVNKSTGVGLDTGGLIAYGCKDIDVDGVIGSPVNGTEEMIRFLWGTVNSAYTFAHRNIRIRNVNITGTVHVEVCTTDTLNSTVEMKNIKATTISLQGMASEYRLSDWSAEKIILDFRYTSGDARDNYRRNKWMVANISNMKCLDPNTGAANVTVQNITVDTLEVSDCNFSIPKTTTATHYRGTPAWRQNGVIYHTKTGTPYGMALLAGDTIVASDGTMFTVTAPGALFYTNETVAAATAGSNSIRSKANLNWTGQYYKTAGCKVKIAGGGGADGADYIGTIIRSGYVNGGNYYFDVYPALQSNVPDGAVLTSVDTPAFKTV
Physico‐chemical
properties
protein length:873 AA
molecular weight: 94959,58050 Da
isoelectric point:5,16890
aromaticity:0,08591
hydropathy:-0,21317

Domains

Domains [InterPro]
DC_1596
STR
6–121
DC_1596 DC_0555 IPR023882
Coil
Unmapped
28–48
Coil G3DSA:2.10.10.80 IPR012334
IPR011050
STR
309–551
IPR011050 DC_0045
IPR011050
STR
517–750
IPR011050
AXY86126.1
1 873
Architecture
STR
ATT
STR
RBD
STR 6-121 | ATT 143-396 | STR 397-750 | RBD 751-873
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXY86126.1
1 873
Domain Start End Length (AA) Confidence
N-terminal 1 315 315 0,9911
Central domain 316 780 466 0,9880
C-terminal 781 873 92 0,6226
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-315
Central
316-780
C-terminal
781-873

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_IME392
[NCBI] 		2301649 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXY86126.1 [NCBI]
Genbank nucleotide accession
MH719082 [NCBI]
CDS location
range 94616 -> 97237
strand +
CDS
ATGGGCGGTCGTTCTAAGTTATTTAGCGAACTGGGCGGAGCTCCTCTTAATACTTATCAGCATGATAACCAGACTCTCGATATTCGCGAGTTAGAAAATCAGCAGAAAGTATTAGACGAGACTCTTGCCGAAACAATAGGCAACGTTAACGAGTTGCAACAGACTGCTGGTCAGTCTATGTATATCCTCGGTAACTATGCCTCCGGAATGGTGATCGAGAACGACCGCCAGTACGTCAGATATGATAATCTGCTGTACTATTGGACTGGTCCTGTACCGTTCACTACCACCGGCAACTTCTACGAAGAATCCTACTGGACTGGTGGGGTACAGAGCGGTATCGAGTGGAGTTACGAGGTACAGGAAGATGGGGAATTCGAGTTTAATATTCCTTACTCCTTTACCAACGTACGTCTATTCGTAGGTGGTGTCCGCCTTACTCGCGTAGAAGATTACACTATCGATGTGATTAATCGCAAGATCACTCTGACTAAGGTTAAGCTGTCGAAGGGTGTCCTGGTGACTGCCGAGCTGAACTCTCGTGATGCTCTTAGCGTTACCCAGGATCGCATCGATAGCCTTACCAGAGAGATCTCAGAGAAAGTAGGTTTCGTTAATTACAAACTTACTGATCTGTCTGAAGGTCAGAGCCTGACTCTCACTACCAGAGTCCAGACTGTAAGCTTCTCAGTAAATGGGGAGTATTATAAATGGGATGGCGTTCTTCCTAAAGTTGTTAATTATGGAGATCCGGAGCCATCTCAATCTGAACAGGGGACTGGTAAGTGGATTCCTGTAGGTTCTGGTGCTCTTAAGTCAGAGCTCATGACTGCTGGCGAAACTACTGGTGCTGCTATTGTCTATCTGAGATATGGTGGCACGGTGGCTGATGGTATTCGATACATCACCCCAGAAATGGCTCGAGCTAAAGGCGACGGTACTACGGACGATACAGCAGCTCTTCGCTCTGCTGTTACCCTGGCTAAGACTTATGGTCTTAAGCTTATGGGTATGGGTACTTACAAGATCTCTAACCAATCGGTGGATATTTCCGGGGTAGTGATCGAGAACCTAACCATAGTTGGTACCGGTGCTAGTTCACAGCTGCTGGTTAATGGCGATACGGACATAACTAAGCTGAACCTTAGCAAATGCGGTATTCGTCACATCAACGGTATCTTTAAACTCGACCAGTTCGAAATTAATGACTGTTCTGCGACTGCTGCTCTGCTGTGTCAGCAATTAGCAGCTAATAGCCAACTGTTCGTCACTAATGGTATTATGCGTCGCTGTAACTATGGTTACCTCCGTCAGGGTAGTCCTGCATCTTCCAAGCCGCTCACTGCGACTCTGCTACAGAACTTACAGTTCTTCGACATGAAGAGCGACCCTATTGAGATTAACTTGGCAGTAGCAGATACCAATACCCGAATCGACAACATCACTGTTGATAATGTCGACGCGACCAGCACTGGTAACGCTAACTGGGGTATTGCAATCGGTCTGGCTGGTACTGGTAACTACTCTCTGACTGCTCCGGACTCCGAGTATATGTCAGACGTGGTGATCAGTAATGTTAAGGTTAAGGGTGCTAAGCAGTGTATCCATATGGAGAAATGCCGAAACATCACTATACGAGACATCGAGATTTACCCAGATGTTAATAAGTCTACTGGCGTAGGTCTGGATACTGGCGGCCTTATTGCCTACGGATGCAAAGATATCGATGTGGATGGTGTGATCGGCTCCCCAGTTAACGGTACTGAGGAGATGATTCGATTCTTGTGGGGTACTGTAAACAGTGCTTACACCTTCGCTCATCGTAACATCCGTATTCGTAACGTAAATATCACTGGTACTGTTCATGTTGAGGTATGTACTACCGATACTCTGAACTCTACTGTCGAGATGAAGAATATCAAAGCTACCACTATATCTCTTCAGGGTATGGCATCCGAGTATCGTCTCTCGGACTGGTCAGCTGAGAAAATCATTCTCGACTTCCGCTACACGTCTGGTGATGCTCGAGATAACTACCGCCGTAACAAGTGGATGGTTGCCAACATCTCCAACATGAAATGCCTTGATCCTAATACTGGTGCGGCTAACGTTACTGTCCAGAACATCACGGTGGATACTCTGGAAGTCTCGGATTGTAACTTCTCTATCCCGAAGACTACCACTGCTACTCACTACCGTGGTACTCCAGCATGGCGTCAGAACGGCGTGATTTATCATACCAAGACTGGTACTCCTTACGGCATGGCTCTTCTTGCTGGTGACACTATTGTTGCCAGCGATGGAACTATGTTCACGGTGACCGCTCCTGGAGCTCTGTTCTATACCAACGAAACTGTTGCGGCTGCCACTGCTGGGTCTAATTCTATCCGTTCTAAGGCTAACCTTAACTGGACTGGTCAGTATTATAAGACCGCTGGATGTAAGGTTAAAATAGCAGGAGGTGGTGGTGCTGATGGTGCTGATTATATCGGTACTATCATCCGTAGTGGTTATGTTAATGGCGGTAATTATTACTTTGATGTGTACCCAGCACTTCAGTCTAACGTTCCTGATGGCGCAGTATTAACTTCTGTAGATACGCCAGCCTTTAAGACAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d01577d138479ee615c6783da59c386179900af62c545aac2fecd36826f7eef
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3290
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50