Protein

View in Explore
Genbank accession
XNX26566.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MAIILHYTRNADGAFDRTKHVGTPMEFVVNRIPDGVPVRVYLGEIGDDTDVTDDFDALKDEDAVYHIIEGAGSGALGAVSKVFGFILKPIAKLFGLNTATNANYTATNNQTTSPNNSLTDRSNKPRPYERSYDICGTVQTIPNDLMQTYKAFNSTGALLEYSYYDAGRGHLYIEADGVTEGDTLISDITGSSVAVYAPYTSPNNTTSPQLQIGDVIDQKLYVTYSNDDVDGIVLKAPNDIGANPSADGKVRYDSSTKIGYIYDSSGDSAFTEFLNVGDIAVLTEFWVKDVAVLDGEFEVLYVDDFEVRIATGGTNQWPNLGSTTYNLTEQSITFIGPKDTYEPSLSDWYYMVRGEVDRVLVNVAGQNGLYKYDGGYNRTSVTVELQYQMIDSQRNPLSDIYTVQATITGNSTDYVGTTIYGQLPTASRFRARMRRITNFDKDYDGTVSDEITFINLYGQIRDTTPNYGNRTTVHSARKQTPRASRLNKPQLRMVVTEMCYKYLGNGVFDSVRTPNTQAVQSLIRLARDPDVGSLNLTTANMDKLLAVQSEIESYFGSASAGEFCYTFDDYKTTMQDIVTTIAEAIFCTPYRRGADILLRFERPRDWPGMVFTHRSKTTATEKWTRTFNDAQVYDSLKFSYIDPDTNVKETITIPAEGGVNTETYDSKGIRNYRQAYWAAYRRYQKNMLNKGHVSFTATEEGIFAMPGRAVSVVKGSRVAPQDGYVVAVNGLTLTLSQPVTFTPGDDHSLILKKRDGCVQSVAGITGSHDREVVMLSAPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGYNYEDRFYKYDGVAPFGSGFSGGSSNGFS
Physico‐chemical
properties
protein length:852 AA
molecular weight: 94252,60050 Da
isoelectric point:4,95928
aromaticity:0,10798
hydropathy:-0,39624

Domains

Domains [InterPro]
DC_0118
STR
1–685
DC_0118 DC_0808
NF040662
Unmapped
355–832
NF040662
XNX26566.1
1 852
Architecture
STR
RBD
STR 1-685 | RBD 701-849 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNX26566.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 227 227 0,9593
Central domain 228 426 200 0,5787
C-terminal 427 852 425 0,1521
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-227
Central
228-426
C-terminal
427-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Eco_AMO_3701M
[NCBI] 		3388610 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNX26566.1 [NCBI]
Genbank nucleotide accession
PQ474795 [NCBI]
CDS location
range 21513 -> 24071
strand +
CDS
TTGGCGATAATCCTGCACTACACGCGAAACGCTGATGGCGCTTTCGACCGTACAAAACACGTCGGGACGCCGATGGAGTTTGTCGTTAACCGTATTCCTGACGGCGTGCCTGTGCGCGTCTACCTCGGCGAAATTGGTGATGATACAGACGTAACGGACGACTTCGATGCGCTTAAAGACGAGGACGCCGTGTACCACATTATTGAGGGAGCGGGTAGCGGGGCGCTTGGTGCCGTTAGTAAGGTATTTGGTTTTATCCTTAAGCCAATTGCCAAGTTGTTCGGCCTTAACACAGCCACCAACGCCAACTACACGGCGACTAACAACCAGACAACATCACCAAATAACAGCCTCACAGACCGCTCCAACAAACCACGCCCTTACGAGCGCTCTTATGACATCTGCGGGACTGTACAGACAATCCCTAACGACCTGATGCAGACGTATAAGGCGTTCAACTCCACCGGTGCTTTGCTGGAGTATTCATACTACGACGCAGGGCGCGGGCATCTGTATATTGAGGCTGATGGCGTCACGGAAGGTGACACCCTGATAAGCGACATCACAGGTTCCTCTGTTGCCGTGTATGCGCCGTATACGTCGCCGAACAACACCACATCTCCGCAACTACAAATCGGCGACGTCATTGACCAGAAACTCTATGTGACATACTCCAACGACGACGTTGACGGTATTGTACTGAAAGCTCCAAACGACATTGGGGCTAACCCAAGCGCCGACGGGAAAGTTCGTTATGACTCGTCAACTAAAATAGGCTACATATATGATAGCTCTGGGGATTCCGCCTTCACCGAGTTTCTTAACGTCGGAGACATCGCGGTCTTAACTGAATTTTGGGTTAAGGACGTTGCCGTTTTAGACGGGGAGTTTGAAGTTCTTTACGTGGACGATTTTGAGGTGAGAATAGCTACAGGCGGTACTAACCAATGGCCTAACCTCGGAAGCACCACCTACAACCTGACCGAGCAATCAATCACGTTTATCGGGCCTAAAGACACTTATGAACCCTCGCTTTCAGACTGGTACTACATGGTGCGGGGAGAAGTTGACCGGGTGCTCGTTAACGTTGCAGGGCAAAACGGTCTCTACAAATACGACGGCGGCTATAACCGCACCAGCGTAACCGTAGAACTCCAGTACCAGATGATTGATTCTCAACGCAACCCGTTGAGCGATATCTACACGGTACAGGCTACGATTACCGGTAATAGCACGGATTACGTCGGTACGACCATTTATGGGCAGTTGCCTACCGCATCGCGTTTCCGCGCCCGTATGCGCCGTATAACGAATTTTGATAAGGACTACGACGGAACGGTAAGCGACGAGATAACCTTCATAAACCTGTACGGGCAAATACGCGACACCACACCTAACTACGGCAACCGAACCACCGTGCATTCCGCGCGTAAACAGACACCAAGGGCCTCGAGGTTAAACAAGCCACAATTGCGAATGGTAGTAACTGAGATGTGCTACAAGTACCTCGGTAACGGTGTTTTTGACTCCGTAAGAACGCCAAACACGCAAGCGGTACAGTCGCTGATTCGTCTTGCCCGTGACCCGGATGTGGGCAGTCTGAATCTGACAACGGCAAATATGGATAAACTGTTGGCAGTACAGAGCGAAATTGAGAGTTATTTCGGTAGCGCATCCGCAGGAGAATTTTGCTATACGTTTGATGATTACAAAACTACGATGCAGGACATAGTAACTACGATAGCGGAAGCAATTTTCTGCACTCCATACCGGAGAGGTGCTGATATTCTTCTGCGATTCGAGCGCCCGCGTGATTGGCCCGGAATGGTGTTCACACATCGCAGCAAGACTACCGCTACGGAAAAGTGGACGCGCACGTTTAACGACGCCCAGGTATACGATAGTCTCAAGTTTTCATACATCGACCCGGATACTAACGTCAAAGAGACAATCACCATCCCAGCCGAAGGCGGGGTTAATACTGAAACGTACGACTCTAAAGGTATCCGTAATTATCGACAGGCGTACTGGGCCGCATACCGTCGATACCAGAAAAACATGTTGAATAAAGGTCACGTATCTTTCACGGCGACAGAAGAAGGGATTTTTGCGATGCCAGGACGTGCCGTAAGTGTGGTGAAAGGTTCACGCGTAGCGCCTCAAGACGGCTATGTTGTTGCCGTTAATGGTCTTACTCTGACGTTATCACAACCGGTTACTTTTACCCCCGGAGACGACCACTCATTGATTCTTAAGAAGCGTGACGGCTGCGTACAGAGCGTTGCTGGTATCACTGGAAGTCATGACCGTGAAGTGGTTATGTTATCCGCGCCGCAGGAGGCAATTTACACAGGGAATAGCGCACTAAAAACTGAGTTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTTGACCCCGGAGATGACAGAACAGTTAAGATTACGGGATATAACTATGAAGACAGATTCTATAAATACGACGGCGTCGCGCCTTTCGGCAGCGGTTTCTCCGGCGGATCCAGCAACGGTTTTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa6093ae408ad48a27477ade5310d5a04b4c8562f8fdc29f54e753c55118686f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50