Protein

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Genbank accession
XCO37825.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTASVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRNVQRGRGINLAVIDGTSLALLDFKTFDMYGDPTTNGTAISDYLSTLPANRIVCFYTFDAIKSTDAFLSYMRTIGSVAWPETRFFNTPSSSTNNPQRSSYSAIYSSTMKKICMENFVGGSGTGLKDNTTSFVEVVFDEFSDIGVTGIPERMVDDVQVYQNSGSAYGFHLYGMWDIGSTVFLGDIFKFTGDVYCSQELRNAGGECYLYMWTQNSSGQWISSAILRTTGLAPDEWHSLSGYFTIPTDAINVKMGCMVYHYPSTVKVGLAQCRNVQISKVPRIETDRNGAAIGVNGIRMQTLSEVDDAGTQNPIDKLLSLPVSPTGVISDKKISSHNFAELDYIVSDPVEYTSTNTAEYQFKEWTATQQAAVTKASLSSYGLKAGDTIRMQCQMKRDANAIANNKGAYIVMQFWDANNTYISGINMRDVGTIPNVYSFYKNEGVIPAGAVTFDFGLYRYPNSTNIGAVSAKDVKLSIVR
Physico‐chemical
properties
protein length:531 AA
molecular weight: 58220,72800 Da
isoelectric point:5,14304
aromaticity:0,11111
hydropathy:-0,14859

Domains

Domains [InterPro]
DC_0004
STR
1–531
DC_0004
PS52031
LEC
24–206
PS52031
IPR039477
STR
62–133
IPR039477
XCO37825.1
1 531
Architecture
STR
STR 1-531
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO37825.1
1 531
Domain Start End Length (AA) Confidence
N-terminal 1 50 50 0,4236
Central domain 51 249 200 0,4723
C-terminal 250 531 281 0,5261
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-50
Central
51-249
C-terminal
250-531

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146010
[NCBI] 		3232194 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO37825.1 [NCBI]
Genbank nucleotide accession
PP889464 [NCBI]
CDS location
range 42682 -> 44277
strand +
CDS
ATGGCGAATAACGAATTTATGGCGTTATTCGGCCCTGATAGTTTCACGGCGAGTGTGTTTTCAGAAGCAAACGCCGTGAAATATCGCCTTGTTGTCCGTGGAACGAATAACGATTCTGCGGTCAACTCGGTTGAGGTATCTATCAATGGGGCTGATATTATTAACCGAAACGTACAGCGCGGTCGAGGGATTAACCTTGCTGTAATTGACGGTACGAGTTTGGCTTTGCTGGATTTCAAAACTTTTGATATGTATGGTGATCCTACTACGAATGGGACTGCGATTAGTGATTACCTATCTACACTTCCAGCAAACAGAATTGTGTGTTTCTATACGTTCGATGCTATAAAATCTACCGATGCGTTTTTGAGTTATATGCGCACAATCGGATCGGTTGCATGGCCTGAAACACGATTCTTTAACACGCCGTCATCATCAACAAACAACCCGCAACGTTCATCCTATTCAGCAATCTATTCATCCACGATGAAAAAGATCTGTATGGAAAACTTCGTAGGTGGTTCTGGTACTGGACTCAAAGACAACACGACGAGTTTTGTTGAGGTTGTATTCGATGAATTCAGTGATATCGGGGTAACTGGTATTCCTGAAAGAATGGTTGATGATGTTCAGGTATATCAGAACAGTGGCAGTGCTTACGGCTTCCATTTATACGGGATGTGGGATATTGGTTCTACTGTTTTCTTGGGGGATATCTTCAAGTTCACTGGCGATGTTTATTGCTCGCAAGAACTTCGCAATGCTGGCGGCGAATGTTATCTCTATATGTGGACACAGAACTCCTCTGGTCAGTGGATATCCTCTGCGATCCTGCGAACAACTGGGTTAGCTCCTGATGAATGGCATTCTCTGTCAGGATATTTCACTATCCCTACGGACGCGATAAACGTGAAGATGGGCTGTATGGTATATCACTACCCGTCTACAGTGAAAGTGGGGCTTGCTCAGTGTCGCAATGTCCAGATCAGTAAAGTTCCACGAATCGAAACCGATCGCAACGGGGCGGCAATTGGTGTCAATGGTATCAGGATGCAAACGCTTTCCGAAGTTGATGATGCTGGAACCCAAAACCCGATTGATAAATTGCTTTCTCTGCCTGTTTCGCCTACTGGGGTTATTAGTGACAAGAAAATCAGTTCGCATAACTTTGCTGAACTTGATTATATTGTTTCTGATCCGGTTGAATACACTTCGACAAATACAGCGGAGTACCAGTTCAAAGAATGGACTGCTACCCAGCAAGCGGCGGTAACGAAAGCATCACTAAGCAGTTATGGCTTAAAAGCTGGTGATACGATCCGTATGCAATGCCAAATGAAACGCGATGCAAACGCAATCGCCAACAATAAAGGTGCATATATCGTAATGCAGTTCTGGGACGCGAATAATACGTATATTTCAGGGATCAACATGCGTGATGTTGGTACGATACCTAACGTATATTCATTCTATAAAAACGAAGGGGTTATTCCTGCTGGTGCGGTTACGTTTGATTTCGGTTTATATCGTTATCCAAACAGCACAAACATCGGTGCGGTATCCGCTAAAGACGTTAAACTGTCAATCGTGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2efe2b6e62aaf1c43d17430b3dfa70892bf7eb080cafda06eebc3f4f85d9d949
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank