Protein

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Genbank accession
WZK93577.1 [GenBank]
Protein name
glycerophosphoryl diester phosphodiesterase
RBP type
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MDENQFSPFSTPLSPIRLQAQLGKETKRMIQEGKNVVRLSLARVVKVNYKYNTVDVITTLNNNSTVKNPNDNGRFSARLPVSFGGKTPDGNIYGANTLVTVGSLVLIGYMEGNKDYPIVLNIYGDADNQSQLTRTSFTSADESDEALQRELWQLFTLYPSMTYKNVDGNGNQEVTFSGKSFLYVTDTDQDNAYVQDAGFNYEDLPSSRYANGELIEPKSPYSPTLLYVHQGIYDKHRVTFFIKSDGTVRLGSKHTSGEGVTFFEMTTDGGFQVVQQKGTANPEETPEKFSKVGILEDGTVVMKSQKHVMEVNNDGVYIDGKAISAFVGGGSVPDGNGGTITLEDVVDSLKDVKTTITIQNGKIESKVGRTEYKIDLDAVKDYSKELFDGVSAEVDDINKSLENLDDLLDESFKDGIIEESEARSIGMYINNLNTQKSELDAKYNQIYTNKYLTGDPKTNLDNAKKDFDLKHQALIDVIQGAIVDGKITTEDREAINNAFDAYHKCVSTLSSAFEAAADAIALAMAKEAEDNAKDFVNGEIKKVNSTITQLADSISSKVESETFTETIKNVNSRIAETEESVSDTNKRVEEVEKKLPYACQIISTDGVAFQGGTYSTTLFAKITKGDQDITSSIDAKILRWTRISNDAAADEEWNKTHGIGVKSITVTNADVRARATFQCTFDTDDLGGG
Physico‐chemical
properties
protein length:689 AA
molecular weight: 75701,05430 Da
isoelectric point:4,72351
aromaticity:0,07983
hydropathy:-0,48868

Domains

Domains [InterPro]
DC_0209
STR
16–554
DC_0209 Coil
DC_0977
RBD
544–684
DC_0977
WZK93577.1
1 689
Architecture
STR
RBD
STR 16-554 | RBD 555-684 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZK93577.1
1 689
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,6603
Central domain 169 678 511 0,2002
C-terminal 679 689 10 0,0718
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-678
C-terminal
679-689

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage BvP
[NCBI] 		3138561 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus velezensis
[NCBI] 		492670 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZK93577.1 [NCBI]
Genbank nucleotide accession
PP468604 [NCBI]
CDS location
range 119656 -> 121725
strand +
CDS
ATGGACGAAAATCAGTTTAGCCCGTTTTCCACTCCACTGTCCCCGATTAGGCTACAAGCCCAGTTAGGGAAAGAAACAAAACGGATGATTCAAGAGGGGAAAAATGTTGTAAGGTTATCCTTAGCCCGGGTTGTTAAAGTTAACTATAAATATAATACAGTTGATGTAATCACGACTTTAAACAACAACTCCACAGTCAAAAACCCTAACGACAACGGAAGGTTTTCTGCCCGGCTCCCGGTGTCCTTTGGGGGTAAGACTCCGGATGGCAATATCTATGGAGCTAATACACTAGTTACTGTAGGGTCACTAGTTCTTATTGGTTACATGGAGGGGAATAAGGATTATCCAATCGTTTTGAATATCTACGGAGATGCGGATAATCAATCACAGTTAACCCGGACGTCGTTTACTAGTGCCGATGAGTCTGATGAAGCACTACAGCGAGAATTATGGCAACTATTTACTCTATACCCTTCGATGACGTATAAGAATGTGGACGGTAATGGGAACCAAGAGGTTACATTTTCAGGGAAGTCCTTTTTGTATGTAACAGATACGGATCAAGACAATGCGTATGTACAGGATGCCGGATTCAACTATGAAGACCTTCCTAGCTCCCGTTATGCTAACGGGGAGTTAATTGAGCCGAAGTCTCCTTACTCTCCTACTTTATTATACGTCCACCAAGGTATCTATGACAAGCATAGAGTAACGTTCTTCATCAAGTCAGATGGTACCGTACGGCTGGGGAGTAAGCATACTTCAGGGGAAGGGGTTACTTTTTTTGAGATGACTACTGACGGAGGTTTCCAAGTAGTTCAACAAAAAGGAACTGCTAACCCTGAGGAGACGCCAGAGAAGTTTTCTAAAGTAGGCATCCTCGAAGATGGTACAGTAGTAATGAAGTCACAGAAGCACGTCATGGAGGTAAACAATGATGGCGTCTACATTGATGGAAAAGCTATTTCTGCCTTCGTAGGTGGAGGAAGTGTCCCGGACGGTAATGGTGGGACTATAACTTTAGAAGATGTAGTCGACAGCTTAAAAGATGTTAAGACAACCATTACAATACAGAATGGAAAAATAGAATCTAAGGTTGGAAGGACAGAGTATAAAATTGACTTAGATGCAGTCAAGGACTACTCTAAAGAGCTTTTTGATGGGGTAAGTGCAGAGGTAGATGACATTAATAAAAGTCTCGAAAACCTTGACGACCTTTTAGACGAGTCATTTAAAGACGGAATTATAGAAGAGTCAGAGGCTCGTTCTATCGGAATGTACATAAATAACTTGAATACTCAAAAGTCTGAACTAGATGCGAAGTATAATCAGATTTATACCAACAAATATTTAACCGGAGACCCTAAGACTAATCTCGATAACGCAAAAAAAGACTTTGATTTAAAGCACCAAGCTCTTATAGATGTCATCCAAGGTGCCATTGTTGACGGTAAAATCACTACTGAAGACCGAGAGGCAATCAACAACGCTTTTGATGCGTATCACAAGTGCGTATCTACCCTTTCCTCGGCTTTTGAAGCTGCAGCGGATGCAATTGCACTGGCTATGGCTAAAGAAGCAGAGGACAACGCTAAAGACTTTGTAAACGGTGAGATAAAAAAAGTAAATTCAACAATCACTCAACTAGCAGATTCAATCAGCAGTAAAGTTGAATCGGAGACGTTTACAGAAACGATAAAAAATGTGAACTCTCGAATCGCCGAAACAGAGGAAAGTGTTTCAGACACGAATAAACGAGTAGAGGAAGTTGAAAAGAAGCTACCGTATGCCTGTCAGATAATAAGTACCGACGGAGTAGCTTTTCAAGGAGGAACCTATTCGACTACTCTTTTTGCCAAAATTACAAAAGGAGATCAGGATATCACATCTTCTATTGATGCCAAGATACTTAGATGGACTAGGATATCGAACGATGCGGCAGCTGATGAGGAATGGAATAAAACACACGGAATCGGAGTTAAGTCAATAACAGTCACTAATGCGGATGTTAGAGCACGAGCTACTTTCCAATGTACCTTTGACACCGATGATCTAGGAGGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca1b63387376ce1dbe988079e2dabf36b452a2200616724fe2e4af5ec2a7a666
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6999
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50