Protein

View in Explore
UniProt accession
D7RMI2 [UniProt]
Protein name
Tail fiber-like protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MNNSQIEPIEGPPGPQGDPGPQGIQGPPGPQGDQGPQGIQGLKGDKGDTGPQGIQGLQGPKGPKGDQGPQGIQGPIGPIGPAGLIWKGEWDVDTLYSVDDAVGYAGASYFCIAENTGNIPTESPENWALLASQGARGESGAQGLQGPKGDKGDTGLQGIQGPKGDKGDTGLQGPIGPIGPKGDQGPQGSRGIQGIQGPQGDQGPQGSRGIQGIQGPQGDQGPQGLQGPQGDKGEDGFGIDSKISGVYKIPASGTKGQFYINLPGAGGLRLIVSTAGTGNAVKIGYGGNSSTVQRTFTIGYNLTANYTDLAKIKTGRINYTGYTSVSYSSDTTALVGYGDMYTAIASNKDTLDSWHIVISGVVAKSSASATDGRLLISVTKVFDSETQQIQTGEIY
Physico‐chemical
properties
protein length:395 AA
molecular weight: 40048,51920 Da
isoelectric point:4,72562
aromaticity:0,05823
hydropathy:-0,56835

Domains

Domains [InterPro]
DC_1284
STR
7–53
DC_1284 G3DSA:2.10.10.20 IPR008160 G3DSA:1.20.5.320 DC_1012
IPR050149
Unmapped
11–249
IPR050149
IPR008160
STR
26–83
IPR008160 DC_0668 G3DSA:1.20.5.320
DC_1060
STR
40–174
DC_1060
D7RMI2
1 395
Architecture
STR
ATT
STR
RBD
STR 7-87 | ATT 88-129 | STR 130-265 | RBD 266-395
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage IME08
[NCBI] 		698728 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADI55498.1 [NCBI]
Genbank nucleotide accession
HM071924 [NCBI]
CDS location
range 108415 -> 109602
strand +
CDS
ATAAACAATTCCCAGATAGAGCCAATAGAGGGTCCGCCGGGCCCTCAAGGAGACCCGGGCCCACAAGGTATTCAAGGCCCGCCCGGCCCTCAAGGAGACCAAGGTCCACAAGGTATTCAAGGCCTTAAAGGAGATAAAGGAGATACAGGTCCACAAGGTATTCAGGGCCTACAAGGACCCAAAGGACCTAAAGGAGACCAGGGTCCACAAGGCATTCAAGGGCCTATAGGTCCTATAGGTCCCGCAGGGCTAATATGGAAAGGAGAATGGGATGTAGATACACTTTACTCTGTCGATGATGCTGTTGGATATGCAGGTGCATCATATTTTTGTATAGCCGAAAATACCGGTAATATACCCACAGAATCGCCGGAAAACTGGGCCTTATTAGCATCGCAAGGAGCTAGAGGAGAATCAGGGGCCCAGGGCCTACAAGGACCCAAAGGGGATAAAGGAGATACGGGTCTTCAAGGTATTCAAGGACCCAAAGGGGATAAAGGAGATACAGGTCTTCAAGGACCTATAGGGCCTATAGGACCTAAAGGAGACCAGGGTCCTCAAGGTTCTAGAGGTATTCAAGGTATTCAAGGTCCCCAAGGAGACCAGGGCCCACAAGGTTCTAGAGGTATTCAAGGTATTCAAGGACCTCAAGGAGACCAAGGTCCGCAAGGCCTTCAAGGACCCCAAGGAGATAAAGGAGAGGATGGATTCGGAATTGATTCTAAAATAAGTGGGGTATATAAAATTCCTGCATCCGGAACCAAAGGACAATTTTATATAAACTTACCTGGGGCAGGTGGTCTTAGATTGATTGTATCAACGGCTGGGACAGGTAATGCTGTTAAAATAGGATACGGAGGTAACTCTAGCACTGTTCAAAGAACATTTACTATAGGATATAATTTAACAGCTAATTATACCGATTTGGCAAAAATAAAAACCGGTAGGATAAATTATACAGGGTATACTTCGGTTTCATATAGTAGCGATACAACGGCTCTAGTCGGATATGGGGATATGTATACAGCAATAGCCTCTAATAAAGATACTTTAGATTCATGGCATATAGTAATATCAGGCGTAGTGGCAAAATCATCTGCTTCGGCCACTGATGGAAGATTACTTATATCTGTAACTAAAGTTTTTGATTCCGAAACTCAACAGATTCAAACAGGTGAAATATATTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
87c30ed5b44571b97c4328d205149714db082d431793054cd087052e5035330f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5589
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50