Protein

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Genbank accession
GENB_a85e14182f54 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
VKNIRHWKKLVIAMVIGLLVFQNVSPVLATMTDDETAKTTLKITKEDKDTKEKINGSTFEIKNKETGETNDLTISANGEATMDSLSPGDYLVKEKVAPKGYTLDEKEYSVTLAEKEEVITSVSAKVQEETTKEATTPTPVKKATQNANLKAAITDNIFNKVTLKDGNGDEINTSDRIQNGSGVVLNMNFAFSGKNYKAGDTFTTVLPDAFNFGNKNLSGNFLPSTEAEWTLDVTTRELTITFLKDGIQEGDYDVNISTAFKVFTSTEETIQEVVFKTAGKDTVYQIEVVPVVNYPTTVGITANPGVVNPTKGQVDAKFNLTKEKDAKGELKLNDYASGGTTTIDKDTIKVYSSDVSAGGTFIGTKKLLVEGTDYTLTYSATSLTVTLNGGLAGKGYQVTYDRTINKPSDSLSYMSTQAYTVGDSGTLSSNSAYVYLTMTNYKHIEKKATYNGSTQSIDWKINFNFDQDEISPSTVLTDVLADNDVEYVADSLKIKRVTFNATNGSPIVGGDASSDWTTSAISANGNFNLTYKNTNTNAYEITYSTKITDFSDRKIKNEITDENGVSADATIAIQPDLLKKEAGTIDYFNNTMTWKITANSDRIKMGNLNITDEFSTGVKALKSYTVRAYTDNINSVLLTEGKDYTIDKDVTPAGFYIQLIGDYATTDKKIVVDFVTEIDLSDVTKTIDNKASISYYDGGIIKYVDDVKASMTPDPAMMTNGGKYGSYNSTTGNIDWIVSVNAMAKNYDNLIFDDAIPTGLTYVEGSLQYRNVASTSEMMNLYIPLNSVGTVAKTGDKNYPTKVDTTGNKLHLEFANLENSRVFIKYSTKPNENWYFYSYVQNTAKVSDNGVGEKSYSYQAYASKLYNAMTKTATIDPSFDNKVNWVVTLNNISADRPINNPTITDTMKTGTTGAQVVKSSFKVINETTGEDIDSKYYDITYTDNNFTIQFKDYKATAPIKVTYSTISLMSGLVSNTATTASPDYGSLPMTYKSRTTSISPAFTIGSGSGTATIGSLEITKVDKKDNTKKLAGAKFQLYTLEGDKAGQEATTDTDGKIVMDGLQSGKYKLVETEAPTGYTISDEYKDGKEITVTADAVTNVTIENTEQTGSAVLLKEDSVTKDAIAGAEFELQNADGTKVAENLVSNADGKIEVTDLAPGDYQFVETKAPTGYVLDATPSEFTIEFNQEAAVIVTKENTAKTGSVVLTKEDSVTKATIAGAEFDLQKADGTKVSENLVTDADGKIEANDLAPGDYQFVETKAAAGYVLDATPSEFTIEFNQDKAAVVTKENTAKSGSVVLTKQDSATKAALSDAEFELQTATGTKVKDNLTTNASGEIEVADLAPGDYKFIETKAPTGYELDATPVTFTIEFNQSTAVKVTKENVAKTGSVVLTKLDSKSRSNLAGAEFELQTKLGVSLKDKVVTEANGQLQIDNLAPGDYQLVETKAPTGYELDATPVEFTIEFNQKDAVQVTKTNKMSTGSVVLTKTDGQTKAPLADATFKLVDADNNVTENLTTDASGKLEITNLAPGDYQLIETKAPKGYELDTVPVDVKISFNQNQVLQVTKTNIKTVVSGKVIAEFVDTKGNVLAEQEIHAGLVGEKYVTKAKSIAGYKLTKDPTNKVGIYKEADQKVTFVYEKNKSPLVVDPTKPIKPSKPTKPSANPSKQATVKKAQSLPSTGDNSLANLIITGLFASTLGLFLLRKSKKVND
Physico‐chemical
properties
protein length:1710 AA
molecular weight: 185122,45100 Da
isoelectric point:4,86817
aromaticity:0,07895
hydropathy:-0,39942

Domains

Domains [InterPro]
IPR013783
STR
40–160
IPR013783 IPR008966 IPR008966 IPR008966 IPR008966 IPR008966 IPR013783 IPR013783 IPR013783 IPR013783 IPR013783 IPR013783 G3DSA:3.10.20.320
IPR008966
STR
155–289
IPR008966 DC_1347
GENB_a85e14182f54
1 1710
Architecture
STR
STR
STR
STR
STR
STR
STR
RBD
STR 40-289 | STR 305-438 | STR 441-562 | STR 580-711 | STR 717-864 | STR 868-996 | STR 1014-1574 | RBD 1575-1709 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LM 4-14-1
[NCBI] 		3113836 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OR848101.1_CDS_[14675..19807] [NCBI]
Genbank nucleotide accession
OR848101.1 [NCBI]
CDS location
range 14675 -> 19807
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
b8ccb26342c4df1be7a5814776bfd1c81a59354eade3883581a9e8c28fe59a0a

                    

                    
                      AlphaFold3
                    
                  

                  

                  

                    

                      Source
                      AlphaFold3
                    

                    

                      Method
                      AlphaFold3
                    

                    

                      Resolution
                      0,8605
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
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Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50