Protein

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Genbank accession
XFC46759.1 [GenBank]
Protein name
glycosyl hydrolase family 28-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSTQRAVSDGTLQVLGISLDFFTKNELSVSLDDVPTSAYTWATDTSIRFVSPIKAGVEVLVRRRTYMDAPLHSFTAGAQFNAKSLDEDFVQILRIAQEAAEGGNVGDFYNDVHMHGYRIRDLGRATLPTDAVNLGQMREETAGSVAAAAASAEAARQSQVIVAAQSLRYIGVRATPPITRVDGTPLQVGDRYTVEGDPTIEAVWTGTRWIQQAVDQAALQASNGALLIGYKGRTVWDRLGDVVNVKDFGAKGDGVADDYLACQNAINYVQLNPLGGVVYFPNGAYRLSAGLVNNRAPDSNRGRVSLWGQGQSTTQLINAGTSLALITLANNQNPVMEQSASYQSVQDMTLVGNAAENSAGLLINLGAFVKLARLTSTNSDFGLYMQDVDQAYFEKVALRFNRRGLFATKSPAPGPSSTMPNNHTYVACTFANNSVYGGLWSGASLTTIIGGDTEYNGASGLGDGFGLQFLNSGYEGGVGAVITGHYFEGNAGRGDVVINSTSAADGPIIGAVHTLTGCTFHRNGVNPNQHHIMVNFGPVAQVGKCKLVTQGCSFKAFGSYVPSAATPAIGYVGVTKANTSTYLDVGSIFHSEVERPAFVTNLGKKEGAAYASANLSVPSGVVTQWAINSVDASKSWSPDITSNGVDIDEDGTYMVAASVTFSNAAPGDKQLLILRNGTMQAAGHVGGQLQICSVAHPIECKAGDRITLNILQSTTVTQIITGGNASRLLLTKLM
Physico‐chemical
properties
protein length:736 AA
molecular weight: 77711,17540 Da
isoelectric point:5,77532
aromaticity:0,07880
hydropathy:-0,04864

Domains

Domains [InterPro]
DC_0044
STR
1–728
DC_0044
IPR005604
ATT
4–105
IPR005604 IPR012334
IPR011050
STR
243–499
IPR011050
IPR024535
ENZ
245–352
IPR024535
XFC46759.1
1 736
Architecture
ATT
STR
ATT 1-105 | STR 106-728 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFC46759.1
1 736
Domain Start End Length (AA) Confidence
N-terminal 1 259 259 0,9932
Central domain 260 600 342 0,9946
C-terminal 601 736 135 0,9912
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-259
Central
260-600
C-terminal
601-736

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage MKPT02
[NCBI] 		3236643 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas tolaasii
[NCBI] 		29442 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC46759.1 [NCBI]
Genbank nucleotide accession
PQ015601 [NCBI]
CDS location
range 30254 -> 32464
strand -
CDS
ATGGCCTATTCGACTCAGCGTGCCGTCTCTGACGGTACGCTTCAAGTCCTCGGTATCTCGCTCGACTTCTTCACCAAGAACGAGCTGTCCGTGTCCCTCGACGACGTGCCTACCAGCGCGTACACTTGGGCCACTGATACGAGCATCCGCTTCGTCTCGCCGATCAAGGCAGGCGTAGAGGTACTGGTCCGCCGCCGCACGTACATGGACGCCCCACTGCACAGCTTCACCGCGGGTGCACAGTTCAACGCCAAGTCGTTGGACGAGGACTTCGTGCAGATCCTCCGCATTGCCCAAGAGGCTGCGGAGGGCGGCAACGTCGGCGACTTCTACAACGACGTGCACATGCACGGCTACCGCATCCGCGACCTCGGTCGGGCTACCCTGCCCACCGACGCTGTGAACCTCGGCCAGATGCGCGAGGAGACCGCGGGTTCCGTGGCTGCGGCTGCGGCATCCGCTGAGGCTGCCCGTCAGTCTCAGGTCATCGTGGCGGCTCAGTCCCTGCGCTACATCGGTGTGCGTGCCACTCCGCCAATCACCCGTGTGGACGGCACCCCGCTGCAGGTGGGCGACCGCTACACCGTGGAAGGCGACCCGACCATTGAGGCTGTCTGGACCGGCACCCGCTGGATTCAGCAGGCGGTCGATCAGGCTGCCCTGCAAGCGTCCAACGGCGCCCTACTGATCGGCTACAAAGGCCGTACAGTGTGGGACCGCCTCGGCGACGTGGTGAACGTGAAGGACTTCGGCGCCAAGGGCGACGGCGTGGCTGACGACTATCTGGCCTGCCAGAACGCCATCAACTACGTGCAGCTGAACCCACTGGGCGGCGTGGTGTACTTCCCAAACGGGGCGTACCGCCTGTCGGCTGGTCTGGTGAACAACCGGGCTCCCGACTCTAACCGGGGCCGTGTCTCCCTGTGGGGCCAAGGCCAGTCCACCACTCAGCTGATCAACGCAGGCACCAGCCTCGCCCTGATCACTCTGGCGAACAACCAGAACCCAGTGATGGAGCAGTCGGCCTCGTACCAGTCGGTGCAGGACATGACCCTTGTGGGCAACGCTGCGGAGAACTCCGCGGGTCTGTTGATCAACCTCGGCGCCTTCGTTAAGCTGGCGCGCCTGACCAGTACGAACAGCGACTTCGGCCTGTACATGCAGGACGTGGATCAGGCGTACTTCGAGAAGGTGGCACTGCGGTTCAACCGTCGCGGCCTGTTCGCTACGAAGTCCCCGGCCCCCGGTCCATCCAGCACCATGCCGAACAACCACACGTACGTTGCTTGCACCTTTGCGAACAACTCCGTGTACGGTGGCCTGTGGTCCGGTGCCTCGCTCACCACCATCATCGGCGGTGATACCGAGTACAACGGCGCATCCGGTCTGGGTGACGGCTTCGGGTTGCAGTTCCTGAACTCCGGCTACGAAGGCGGTGTAGGCGCAGTGATCACTGGTCACTACTTCGAAGGCAACGCAGGGCGGGGTGACGTTGTGATCAACAGCACCTCAGCGGCAGACGGCCCGATCATCGGCGCTGTGCACACGCTGACTGGCTGCACCTTCCACCGCAACGGCGTGAACCCGAACCAGCACCACATCATGGTGAACTTCGGGCCTGTCGCTCAGGTTGGCAAGTGCAAGCTCGTGACTCAGGGTTGCTCGTTCAAGGCGTTCGGCTCGTACGTCCCAAGCGCAGCCACACCGGCCATCGGCTATGTGGGTGTGACTAAGGCGAACACCTCGACCTACCTCGACGTTGGCTCCATCTTCCACTCGGAAGTAGAGCGCCCGGCGTTCGTTACCAACCTCGGCAAGAAGGAAGGCGCTGCGTATGCATCTGCCAACCTGAGTGTCCCGAGCGGTGTGGTTACGCAATGGGCCATCAACTCGGTGGACGCTTCGAAGTCGTGGTCTCCGGACATCACCTCGAACGGCGTGGACATCGACGAGGACGGCACCTACATGGTAGCAGCCTCTGTGACGTTCAGCAACGCAGCGCCCGGTGACAAACAACTCCTGATCCTGCGTAACGGCACGATGCAGGCGGCGGGTCACGTAGGCGGTCAGTTGCAGATTTGCAGCGTGGCGCACCCAATCGAGTGCAAGGCGGGTGACCGCATCACCTTGAACATCTTACAATCCACCACGGTTACTCAGATCATCACAGGCGGTAACGCCTCGCGGTTGCTTCTGACTAAGCTCATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a458d6f7f74e10981547bc133efd1e519b734e868773e22b5c0ccf3bb19c53bd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8195
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50