Protein

View in Explore
Genbank accession
YP_010682898.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLLTIHDANLQKIGFIDNEKQETLNFYNDTWTRNLGTASSTFEFTVSKKQLLSDTANKPLYNQLNERSFVSFKHKGQTYLFNIMKVEENERWIRCYCENLNLELINEYTNPYKADRPLSFAEYLDVFEIPQFAMVKIGVNEISDQKRTLEWEGQDTKLARLLSLANKFDAEVEFVTQLNDDSSIKQLVLNVYHKADDSHTGVGRIRGDIRLTFEKNIKSMTRKIDKTEVYTLVVPYGKSKESHEGEQEVRVYIDNLPPWEEKDDNGIVIFKQEGVNLYAPHAADLYPSTFGVSTQSNKWIRKDLEVDSDNPNVIRAAGIANLRKHAYPAITYEVDGFIDVEIGDTITIHDKGFTPALDVRARAVEQKISFSNPTNNKTTFGNFKELENRTSGDLRSVFERMVENSRPYTIMVSTDNGVLFKNNTGRSTISPTLKRGNQTVPATYRFVIDGSIVSSGLTYTVKASDITKPTVITISAWVDNKEVASEEVTFLNVSDGKQGPQGPQGPQGPKGDRGNDGIAGKDGVGLKSTTITYGLSDSDSTQPTNWTSQPQTLIKGKYLWTKTVWTYTDSSSETGYQKTYIAKDGNDGNDGLPGKDGVGLVDTTIEYLKHTDGQIAPNPKYYSSFNWKGLTLSQHLELDWVNDLTLIKSGKPVKYTDLKVGELVIDRTGEIFPIKEIFGTEGDSSNPGYINLKPSIGKWSKDIPTVNPGEYLWTRTTWFYSDGTSEQGFSVAKMGKQGPQGPQGPQGPKGDRGIPGPKGADGRTQYTHIAYADTVSGSGFSQTDVNKPYIGMYQDFNAIDSQNPQDYRWSKWKGSDGKDGIPGKAGADGRTPYVHFAYADSADGQKGFSLIQTGRKRYLGVLTNFVKEDSTNPEDYTWNDTSGSVSVGGRNLLVKTNQGITNWDWTMSNGDKSVEEVKVDGIRAVKLTKGTKTANTGWNYIQYRGLLRKLIRPNTQYTLSFDVKPSVDVSFSATLIRGNRQAELTDTVLMNKALANQWTKVSCVLQSKPIFPNDLSQVVYLSGMPTTNGNWVIIKNLKLEEGDIPTQWTPAIEDIQDEIDSKADDVLTQAQLNRLNEMDSIIKAELAAKASLDTLDQWKQAYQDFVNANNANRAQAEKDLADASARVTKLENDLNDMSERWNFIDSYMSASNEGLVVGKTDNSSSIMFNPSGRISMFSAGHEVMYISQGVIHIENGIFSKTIQIGRYREEQDSINQDRNVIRYVGGF
Physico‐chemical
properties
protein length:1227 AA
molecular weight: 137002,19420 Da
isoelectric point:5,49851
aromaticity:0,09454
hydropathy:-0,59837

Domains

Domains [InterPro]
DC_0266
STR
1–671
DC_0266 G3DSA:1.20.5.320 DC_0002
IPR007119
Unmapped
57–381
IPR007119 G3DSA:1.20.5.320 DC_1545 G3DSA:2.60.120.260 Coil
IPR010572
ENZ
144–385
IPR010572 PTHR24637
YP_010682898.1
1 1227
Architecture
STR
STR 1-1227
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010682898.1
1 1227
Domain Start End Length (AA) Confidence
N-terminal 1 901 901 0,9686
Central domain 902 1189 289 0,2807
C-terminal 1190 1227 37 0,9218
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-901
Central
902-1189
C-terminal
1190-1227

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage CHPC952
[NCBI] 		2365056 Uroviricota > Caudoviricetes > Aliceevansviridae > Brussowvirus CHPC952 >
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010682898.1 [NCBI]
Genbank nucleotide accession
NC_071072.1 [NCBI]
CDS location
range 16433 -> 20116
strand +
CDS
ATGTTGCTAACAATTCACGACGCTAATTTGCAGAAGATTGGCTTCATCGATAACGAGAAGCAAGAAACGTTAAATTTCTATAATGATACTTGGACCCGAAACCTTGGAACAGCATCAAGCACGTTCGAGTTTACTGTTTCTAAAAAACAGCTACTTAGCGATACAGCGAATAAGCCGCTTTACAACCAACTAAACGAGCGCTCTTTCGTTTCCTTTAAACACAAAGGTCAGACGTATCTTTTTAATATCATGAAAGTGGAAGAGAATGAGCGATGGATACGTTGCTATTGTGAGAACTTAAACCTTGAGCTGATAAACGAGTACACGAACCCTTACAAGGCTGATAGACCTTTGTCATTTGCGGAGTATCTTGATGTTTTTGAAATTCCTCAGTTTGCGATGGTTAAAATAGGTGTTAATGAGATCTCTGATCAGAAGAGAACGCTCGAGTGGGAAGGGCAGGACACAAAACTGGCAAGGCTCTTAAGCTTGGCCAATAAATTTGACGCTGAAGTTGAATTTGTGACTCAACTTAACGATGACAGTTCAATTAAGCAACTCGTTTTGAACGTTTACCATAAAGCGGACGACTCGCACACTGGTGTGGGTCGAATTCGCGGTGACATTCGTCTGACTTTTGAAAAGAATATCAAATCAATGACGAGAAAGATTGATAAGACCGAAGTTTATACGTTGGTAGTTCCTTATGGAAAATCAAAAGAGAGTCATGAAGGCGAGCAAGAAGTACGTGTATACATTGACAACCTCCCACCTTGGGAGGAAAAGGACGACAATGGTATCGTTATTTTCAAACAAGAGGGCGTAAACCTCTACGCACCTCATGCAGCGGACTTATACCCGTCTACTTTTGGCGTATCAACTCAATCTAATAAATGGATTCGAAAAGACTTAGAGGTTGATAGCGATAATCCAAATGTCATCCGTGCTGCAGGAATTGCAAATTTGCGTAAACACGCATATCCAGCTATCACTTACGAGGTTGACGGTTTTATTGATGTCGAAATTGGGGATACGATAACAATCCACGACAAAGGATTCACACCAGCGCTTGACGTGAGAGCGCGTGCCGTTGAGCAAAAAATTAGCTTCAGCAATCCAACCAACAATAAGACCACTTTCGGAAACTTCAAAGAGCTTGAAAACAGAACTTCTGGAGACCTTAGGAGTGTCTTTGAACGTATGGTCGAGAACAGTCGACCATACACTATCATGGTTTCAACCGATAATGGTGTCCTTTTTAAAAACAATACAGGGCGGTCAACCATAAGTCCAACGTTGAAACGAGGAAACCAGACCGTTCCCGCAACATATCGATTTGTGATCGATGGCTCTATTGTTAGCTCTGGTCTGACCTATACCGTCAAAGCAAGCGATATCACAAAACCAACTGTAATTACAATTTCAGCGTGGGTAGATAACAAAGAAGTAGCTTCAGAAGAAGTTACTTTTTTGAATGTATCAGACGGTAAACAAGGACCTCAAGGCCCACAAGGACCACAAGGACCTAAAGGAGATAGAGGTAATGACGGTATAGCTGGTAAAGACGGGGTAGGCTTGAAATCTACCACAATCACTTACGGTCTAAGTGATTCTGATTCTACTCAACCTACTAACTGGACTAGTCAACCACAAACTTTAATTAAAGGGAAATACCTATGGACTAAGACAGTCTGGACATATACGGACTCATCTAGTGAGACTGGGTATCAAAAGACTTATATTGCCAAAGATGGTAACGATGGAAATGATGGCTTGCCAGGTAAGGATGGAGTCGGTCTAGTTGATACTACAATCGAGTATCTAAAACACACAGATGGTCAGATAGCACCTAATCCAAAATACTACTCAAGTTTTAATTGGAAAGGTTTAACATTATCTCAACATTTAGAGCTTGATTGGGTTAATGACCTGACACTTATCAAGAGTGGTAAACCTGTCAAATACACTGACTTAAAAGTCGGTGAGCTTGTAATTGATAGAACCGGTGAAATTTTCCCTATCAAAGAAATCTTTGGGACTGAAGGAGATAGCAGTAACCCAGGATACATTAATCTAAAACCTTCAATTGGAAAATGGAGTAAAGATATTCCAACAGTTAATCCCGGTGAGTATCTCTGGACAAGGACTACGTGGTTCTATTCAGACGGTACGAGTGAGCAAGGTTTTTCGGTCGCTAAAATGGGTAAACAAGGACCTCAAGGCCCACAAGGACCACAAGGACCTAAAGGAGATAGAGGTATTCCAGGTCCTAAAGGTGCAGACGGAAGAACCCAATATACACATATCGCTTACGCTGATACTGTTTCGGGTAGTGGCTTCAGTCAAACAGATGTCAATAAACCATACATCGGAATGTATCAAGACTTCAATGCTATTGACAGTCAAAACCCACAAGATTATCGATGGTCTAAGTGGAAAGGTAGCGATGGTAAAGATGGTATTCCTGGTAAGGCTGGGGCGGACGGAAGAACACCTTACGTGCACTTCGCTTACGCAGACAGTGCCGATGGTCAAAAGGGTTTCAGTTTGATACAGACTGGACGTAAGCGCTACTTAGGTGTGCTAACCAACTTCGTCAAAGAAGACAGTACTAATCCAGAAGATTATACTTGGAATGACACTTCGGGCAGTGTATCAGTTGGTGGTCGAAACTTGCTTGTAAAAACTAATCAAGGTATTACTAATTGGGATTGGACGATGTCGAATGGTGACAAGAGCGTTGAAGAAGTAAAGGTTGATGGTATTCGTGCTGTTAAATTAACCAAAGGCACAAAAACAGCAAATACTGGTTGGAACTACATTCAATATCGAGGTTTGTTGCGTAAACTCATACGACCAAACACACAGTACACTCTTTCTTTTGATGTAAAACCAAGTGTTGATGTAAGTTTTTCAGCAACGCTAATAAGAGGCAACCGCCAAGCTGAATTGACTGATACTGTCCTTATGAATAAAGCTTTGGCAAATCAATGGACTAAAGTATCATGTGTTCTGCAAAGTAAACCAATTTTCCCAAATGATTTGTCTCAAGTAGTCTACTTGTCAGGTATGCCAACAACAAACGGTAATTGGGTAATAATTAAAAATCTCAAACTTGAAGAAGGTGACATACCTACTCAGTGGACACCCGCCATCGAGGATATACAAGATGAAATTGATTCCAAGGCTGATGATGTCCTAACACAAGCACAACTCAACAGGCTGAATGAAATGGATTCTATTATAAAAGCTGAACTTGCTGCTAAAGCCTCACTTGATACACTTGACCAATGGAAGCAAGCCTATCAAGATTTCGTTAACGCAAACAATGCCAATCGTGCTCAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACTAAACTAGAAAACGACTTAAATGATATGTCAGAACGTTGGAATTTCATCGATAGCTACATGAGTGCATCGAATGAAGGTCTAGTTGTTGGTAAAACGGATAATTCTAGCTCTATTATGTTCAATCCAAGTGGGCGTATATCAATGTTCTCAGCTGGGCACGAGGTAATGTATATCTCGCAAGGTGTGATTCACATTGAAAACGGTATTTTCTCGAAAACTATCCAAATAGGACGATATCGAGAGGAACAAGATTCTATTAATCAGGATCGCAACGTCATCCGCTATGTAGGAGGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4dd1cc11fd3decd6842786bd80805fa4a1dccfbbcb4c5497565efd1d3fd9234
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6958
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T. 2019-05-29 — GenBank