Protein

View in Explore
Genbank accession
WPK33233.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEIAPEYVHWRPLQEGEDPAIASSNGMVAEGVMYDRLTVPLIHHVKKLKAENDEMRKEIDELKAVVAALVNKPTTLD
Physico‐chemical
properties
protein length:107 AA
molecular weight: 12267,88090 Da
isoelectric point:4,94087
aromaticity:0,07477
hydropathy:-0,44673

Domains

Domains [InterPro]
IPR030392
CHP
1–89
IPR030392
DC_0536
STR
1–107
DC_0536
Coil
Unmapped
75–102
Coil
WPK33233.1
1 107
Architecture
STR
STR 1-107
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV105
[NCBI] 		3077251 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK33233.1 [NCBI]
Genbank nucleotide accession
OR352936.1 [NCBI]
CDS location
range 45135 -> 45458
strand -
CDS
ATGCTTGAAATGCGTCCTGTGTGGTATCGGTCAACCTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGGCTAATCGCGGAAGAGGTTGGAGAAATTGCGCCGGAGTACGTTCACTGGCGACCGCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTGGCGGAAGGCGTTATGTATGACCGCCTCACTGTTCCACTGATTCACCACGTTAAGAAACTGAAAGCGGAAAACGATGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGCGGCACTGGTAAACAAACCAACCACGTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
41502b52b78ff84c9829b84a92985efdf3fdd222cfa826474a034d36ec7569d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8510
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank