Protein

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Genbank accession
YP_006990327.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLLTIHDANLRKVAFIDNDKQETLNYYDDTWTRSLETGSSTFEFTVYKKAIKSDTAINKTYNLLNERAFVSFRHNGKSYVFNVMTVEENEQTIKCYCENLNLELINEYANPYKATKAMSFVEYCNAMDLLNFTHLSVGINEISDQKRTLEWDGQDTKLARLLSLAKKFDAEIDFDTQLNADSSIKSFKVNVYYENDDKHQGVGRVRNDIQLTYGKNLKSITRKIDKTGVYNAIRPTGKRTVKNGKGEEVEEIVTIGSLGEWSENNKDGVREFYQQGDMLYAPLSMQMYPSTFTSSTTNDQWIRKDMEVDSDSPSVIRASAIANLRKNAYPALTYEVDGFIDVEIGDTIRIYDEGFTPILLVQARVSHQKISFTNPASNQTTFANFKALENNLSDGIQAAFERLFEASKPYLIKLSTDNGVIFKNQIGQSLVTPSLYRGGKPVVSGVTWRWSLDGTVTTGMTYTVRGADVTDTVTLTVAAYIGNDEVAVDEISFVNVLDGTMGTPGTPGKDGRTPYVHTAWANNSTGTDGFSLDSSVNKLYIGIYTDFEPMDSQDPRKYKWTKIKGDKGDKGDPGQRGLDGLQGEKGEQGLPGAKGADGKTQYTHIAYANSSDGRTDFSTSASNRSYIGMYVDFNSQDSTNPSDYAWTLVKGADGANGIAGKAGVDGRTPYLHIAYATSNNGSQGFSTTDSVNKTYIGTYTDYVQVDSTDYRVYKWTLIKGADGNGIANVTNYYLATTASTGVTRSTAGWTTIPQTITSAKRYHWNYRVELYTDGTSKTTEPAIIGVYGDKGDTGARGIQGIQGVRGEQGIPGEKGADGRTQYTHIAYADNAAGGGFSQTDQTKAYIGMYQDFNATDSNNPNSYRWTKWKGSDGAQGIPGPKGADGRTPYVHFAYSDNADGTGLTTSDNGQRYIGHYSDYTQADSTDKTKYRWADRWAKIEVGGRNYIRNFGFTDSSYTLNNANSQWRYERIADPTSRSGYHIKATCTQAGSGGFHRPFVDLRGAHWQGRTMTYAVDVKCSRAVTIAIGAEAIESGMKDQSVSTEWQRFAVTGKVKHISTWSFVFYIRNSQWQVGDVVYIRDPQLEDGTVATTPSSAPEDIENQIDSKADQALTQEQLNSLNERAQILDAELKAKASMNALSDLEKAYQSFVKSNADSRAKAESDLAEAGRRIDLLVTQFGGFKELKTFIDTYMSSSNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVIHIDNGIFTASVQIGKFRTEQYHLNVDMNVIRYVG
Physico‐chemical
properties
protein length:1269 AA
molecular weight: 140339,58500 Da
isoelectric point:5,64635
aromaticity:0,10481
hydropathy:-0,56856

Domains

Domains [InterPro]
DC_0266
STR
1–668
DC_0266 DC_1328 Coil
IPR007119
Unmapped
65–382
IPR007119 PTHR24637
IPR010572
ENZ
144–386
IPR010572 G3DSA:1.20.5.320 DC_1545 G3DSA:1.20.5.320 DC_0921
YP_006990327.1
1 1269
Architecture
STR
STR 1-1269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006990327.1
1 1269
Domain Start End Length (AA) Confidence
N-terminal 1 944 944 0,9735
Central domain 945 1231 288 0,4191
C-terminal 1232 1269 37 0,9274
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-944
Central
945-1231
C-terminal
1232-1269

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage phiNJ2
[NCBI] 		1239381 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus suis
[NCBI] 		1307 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006990327.1 [NCBI]
Genbank nucleotide accession
NC_019418.1 [NCBI]
CDS location
range 4481 -> 8290
strand -
CDS
ATGCTATTAACAATTCATGATGCAAATCTAAGAAAAGTAGCATTTATTGATAACGATAAACAAGAAACTTTAAACTACTATGATGACACTTGGACACGCAGCCTAGAAACAGGGTCTTCAACTTTTGAATTTACAGTATACAAGAAAGCTATAAAGTCTGATACAGCGATAAATAAAACATATAACTTGCTGAATGAACGTGCTTTTGTCTCATTTAGACACAACGGCAAAAGCTATGTATTTAATGTGATGACTGTTGAGGAAAATGAGCAAACCATCAAATGCTATTGTGAAAACCTAAATCTTGAGCTTATCAATGAATATGCTAACCCATACAAGGCTACTAAAGCCATGTCTTTTGTTGAGTATTGTAATGCAATGGATTTGTTGAATTTCACTCATTTATCCGTTGGTATCAATGAGATTTCGGACCAAAAACGGACTCTAGAATGGGATGGGCAGGATACCAAACTTGCCCGCTTACTAAGTCTTGCCAAAAAGTTTGATGCAGAGATTGATTTTGATACGCAGTTAAATGCTGATAGTTCCATCAAATCATTTAAGGTAAATGTGTATTATGAAAACGACGATAAACATCAAGGGGTAGGGCGTGTCAGAAACGATATTCAGCTAACCTATGGGAAAAATCTTAAATCAATCACACGTAAGATTGATAAAACAGGTGTCTATAATGCTATCCGTCCAACAGGGAAACGAACGGTAAAAAATGGTAAAGGGGAAGAAGTAGAGGAAATTGTAACCATCGGTAGCCTTGGGGAATGGTCTGAAAATAACAAGGATGGGGTGCGTGAGTTTTACCAGCAAGGAGATATGCTCTACGCTCCATTGTCAATGCAGATGTATCCATCAACTTTTACCAGTTCTACCACAAATGACCAATGGATTAGGAAAGATATGGAGGTTGATAGTGATAGTCCATCAGTTATTAGGGCGTCTGCTATTGCAAATCTTAGAAAAAACGCCTATCCTGCATTGACCTATGAAGTGGATGGCTTTATTGATGTTGAAATTGGTGATACTATCAGGATTTATGATGAGGGCTTTACTCCTATTTTGCTTGTACAAGCAAGGGTATCACATCAAAAAATCAGTTTTACCAATCCAGCAAGCAACCAAACAACCTTTGCCAATTTCAAGGCTCTTGAAAACAATCTATCTGATGGTATACAGGCAGCTTTCGAGCGCTTATTTGAGGCATCTAAGCCCTACCTTATTAAGTTATCCACAGACAACGGGGTCATTTTCAAAAATCAGATTGGGCAAAGCCTGGTTACACCGTCCTTGTATCGAGGTGGTAAGCCAGTGGTTTCTGGTGTCACTTGGCGTTGGTCGCTAGATGGTACGGTCACAACTGGCATGACTTACACTGTTCGTGGAGCAGATGTGACAGATACGGTTACATTGACGGTTGCAGCATACATTGGTAACGATGAGGTGGCGGTTGATGAAATTTCCTTTGTCAATGTCTTGGATGGCACTATGGGAACGCCAGGAACGCCAGGTAAAGATGGTCGTACCCCTTATGTACATACGGCATGGGCTAATAATTCAACAGGTACGGATGGATTTTCTTTAGATAGTTCTGTTAATAAACTCTACATTGGTATCTATACTGACTTTGAGCCAATGGATAGTCAAGACCCAAGAAAATATAAATGGACAAAAATAAAAGGCGACAAGGGGGATAAGGGAGACCCTGGACAGCGTGGACTTGATGGCTTGCAAGGAGAAAAAGGCGAGCAAGGGTTACCTGGCGCAAAAGGTGCAGATGGTAAAACGCAGTACACCCATATTGCCTATGCCAACTCTAGCGATGGTCGTACTGATTTCAGTACAAGTGCCTCTAATCGCTCCTATATAGGAATGTATGTGGACTTTAACAGCCAAGACAGTACTAATCCATCTGATTATGCTTGGACACTTGTAAAAGGGGCTGACGGAGCAAACGGTATAGCAGGTAAGGCAGGCGTAGATGGTCGGACGCCATACTTACACATTGCCTATGCCACATCAAATAATGGCTCACAGGGATTTTCAACAACGGATAGTGTCAATAAAACATACATTGGCACATACACGGACTATGTGCAGGTAGACAGCACAGATTACAGAGTCTATAAGTGGACTTTAATCAAGGGGGCAGATGGCAATGGGATTGCCAATGTCACGAACTACTATCTTGCTACCACAGCCTCAACAGGGGTGACAAGAAGTACAGCGGGCTGGACAACTATACCCCAGACAATCACAAGTGCCAAGCGGTATCACTGGAATTACCGAGTAGAACTATACACCGATGGCACAAGCAAGACTACAGAGCCAGCCATTATTGGTGTATATGGTGATAAGGGCGATACTGGTGCGCGTGGTATTCAAGGTATACAGGGTGTCAGAGGTGAGCAAGGCATCCCAGGAGAGAAAGGTGCTGATGGTCGTACTCAATACACTCATATAGCCTATGCAGACAATGCCGCTGGCGGAGGGTTTAGCCAGACAGACCAGACAAAGGCCTATATCGGTATGTATCAGGACTTTAATGCTACCGACAGTAATAATCCAAACTCTTATCGCTGGACTAAATGGAAAGGCTCTGACGGTGCCCAGGGAATACCTGGACCAAAAGGTGCTGACGGTCGTACACCTTATGTGCACTTTGCATACTCTGACAACGCAGACGGCACAGGTCTGACCACGTCTGATAATGGTCAGAGGTACATTGGACACTATTCGGACTATACCCAGGCTGATAGTACGGATAAGACAAAGTATCGCTGGGCTGATAGATGGGCAAAGATTGAGGTTGGCGGACGGAACTACATTCGTAATTTTGGTTTTACCGACAGTAGCTATACTTTAAACAACGCTAACTCACAGTGGCGTTACGAACGAATTGCAGACCCGACATCACGAAGTGGTTATCACATTAAAGCGACTTGTACACAGGCGGGGAGCGGAGGATTCCACCGACCTTTTGTTGACCTACGTGGAGCACATTGGCAAGGTCGTACAATGACCTATGCAGTTGATGTTAAATGTTCACGAGCCGTTACTATCGCAATTGGAGCCGAGGCGATAGAATCTGGGATGAAGGACCAAAGCGTGTCGACTGAGTGGCAGAGATTTGCTGTGACAGGTAAAGTCAAGCACATCTCGACGTGGTCGTTTGTTTTTTACATCCGCAATAGTCAGTGGCAAGTTGGCGATGTGGTCTATATCCGCGACCCACAGCTCGAAGACGGTACTGTTGCAACGACACCATCATCAGCTCCAGAAGACATAGAAAATCAGATTGACTCAAAAGCGGACCAAGCATTGACCCAAGAGCAACTTAATTCACTAAACGAGCGGGCGCAGATACTTGATGCAGAGCTTAAAGCAAAGGCGTCTATGAATGCGCTTAGTGACCTCGAGAAAGCTTATCAATCATTTGTAAAATCAAATGCTGATAGCCGAGCCAAAGCAGAGTCAGACTTGGCAGAGGCAGGCAGACGGATTGATTTGCTTGTTACTCAATTTGGTGGTTTTAAAGAGCTGAAAACATTTATTGATACTTATATGTCAAGTTCTAACGAGGGTTTGATTATCGGTAAGAATGATGCAAGCTCAACCATTAAAGTGTCAAGCGATAGAATTTCCATGTTTTCGGCAGGGAAGGAAGTAATGTATATTAGTCAAGGTGTTATCCATATCGACAATGGTATCTTTACTGCCTCTGTACAGATTGGTAAATTTAGGACTGAACAATATCATCTCAATGTCGACATGAATGTCATACGGTATGTTGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
dc9e62ad599b4c51bd831e99663f63fe121eabd521871eef2fc9ab1a73dd468c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50