Protein

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Genbank accession
WYA87449.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAQMIKTNMGLFDMAEEIKIYGAKGGSQKQHQPVEQEDNLISLNKVKVLLAVADGEVDSNFSMKDLYLADVPVQNQDGSYNYEGVRAEFRAGTQYQDYIAGLDGANSEIQASREITNDTPYIIAVNNTQLSAIRVKLFWPRLVKQESNGDLNGTTCEYAIDLSVNGGAYQEYTRGVANGKTTTGYDRSIRVNLPAEFDSALVRIRKITPDSTISTLVNGMQITTYQEVIDAKFRYPLTALVYVEFGSDLFPNGIPTISIKKRWKLIQVPTNYDPETRTYSGTWNGLFKIAWSNNPAWVLYDLVTNRRYGLDQRELGVEIDKWGLYEAAQFCDQMVPDGKGGMEPRYLCDMVVQNKVEAYTLIRDICSIFRGLTFYDGEKIGIVVDKPRNPSYIFTNDNVVNGLFSRTFASDKSLYTTANVQFDDVENNYQQDVEPVFELEATRRFGFNPVDLTAIGCTRRSEANRRGRWLLKTNLRSETISFTTGLEGMIPMIGEVIAVNDAAWSSNYQLNLSGRIESVQGLQVFTPFKVDAAPGDRILLNKPDGSPEARTIASVSEDGRTINLNTAFSFVAQPDTVFAIDKDNLALQQYVVTGIQKADSDGSDSFQYTITAVEYDPNKYDEIDYGVNIVDRPTSIVEPDRLSPPENLTVSSYSKVVQGLSVETMVIGWDKAPYAKTYNVQWRKENGNWINVPRTASTEVDIEGIYAGIYDVRVRSVSDTENVSAWSDIVTVSLTGKIGRPSAPTVITASNDEVFGIRVKWGFPYGSGDTAYTELQQVPDNGDGTYNPDNASLLTLLPYPAYEYWHTPIQPGKVIWYRARLIDRIGNTSDWSNFSRGMSTDDANIINDYIKVDIEGSEGFKYLEQNAIQKNQDIQNQAESILENALANDTDVRRMTKENGKRKAEYVQAVNLIADETQARVEALTQLKAQIDDEVVASITEVQTALATETEARTTSDTQLSARIGDNEAALNQKLDAFANATSTGVQYGISLGLKYNGQTYSSGMSMELVGTGGNVRSQFIFDANRFAISNGIGSGSGQWQLPFVVENGNVIIQSAVIGDGSISNAKIGNFIQSNNYVAGTTGWRIDKSGSAELSNATVRGNLYANNGNFAFNGTNNTVQINNNGITVNLPNGGRVVVGVW
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 126113,97900 Da
isoelectric point:4,72306
aromaticity:0,09465
hydropathy:-0,36345

Domains

Domains [InterPro]
DC_0014
STR
1–1141
DC_0014
IPR053171
Unmapped
19–895
IPR053171 Coil IPR015406
IPR055385
ATT
106–231
IPR055385 IPR032876 IPR036116 Coil
IPR013783
STR
643–737
IPR013783
IPR003961
STR
644–738
IPR003961
WYA87449.1
1 1141
Architecture
STR
ATT
STR
ATT
STR
STR 1-105 | ATT 106-231 | STR 232-355 | ATT 356-502 | STR 503-1141
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYA87449.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 522 522 0,9351
Central domain 523 1074 553 0,0454
C-terminal 1075 1141 66 0,6202
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-522
Central
523-1074
C-terminal
1075-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PsgS01F
[NCBI] 		3122168 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. garcae
[NCBI] 		251653 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas coronafaciens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYA87449.1 [NCBI]
Genbank nucleotide accession
PP134917.1 [NCBI]
CDS location
range 30436 -> 33861
strand -
CDS
ATGGCACAAATGATCAAAACAAACATGGGGCTTTTTGATATGGCTGAAGAGATTAAGATTTATGGTGCTAAGGGTGGTAGCCAGAAGCAGCACCAACCAGTGGAACAAGAAGACAACCTGATTTCATTAAACAAGGTTAAGGTATTACTTGCTGTCGCTGACGGAGAGGTGGATTCAAACTTCTCAATGAAGGATTTATACCTTGCTGACGTTCCCGTGCAAAATCAGGATGGTAGCTACAACTATGAAGGTGTTCGCGCTGAGTTTCGAGCTGGTACTCAGTATCAGGACTATATCGCTGGCCTTGATGGTGCAAATTCAGAGATTCAGGCATCCAGAGAGATCACGAACGATACCCCGTATATCATCGCGGTTAACAATACCCAGCTATCAGCAATTCGAGTTAAGCTATTTTGGCCTCGACTTGTTAAGCAAGAAAGCAACGGCGACCTGAACGGAACAACCTGCGAGTATGCGATTGACCTTTCTGTTAATGGCGGTGCTTACCAGGAATACACTCGCGGAGTTGCTAACGGGAAGACAACCACAGGTTACGACCGCAGCATTCGTGTAAACCTCCCTGCTGAATTTGATAGCGCATTGGTTCGCATCCGCAAGATTACACCCGATTCAACAATCAGTACGCTGGTAAATGGTATGCAGATTACAACCTATCAGGAAGTAATCGACGCCAAATTCCGCTACCCGCTTACAGCGCTTGTTTATGTTGAGTTCGGCTCCGACTTGTTCCCCAACGGAATCCCAACAATCTCAATCAAGAAGCGATGGAAGTTAATTCAGGTCCCAACGAACTATGATCCTGAGACTAGAACCTACAGCGGCACGTGGAATGGCCTGTTCAAGATTGCATGGTCAAACAACCCGGCGTGGGTTCTCTATGACTTAGTGACAAACCGCCGATATGGTCTTGATCAGCGAGAGCTTGGTGTAGAGATTGATAAATGGGGACTGTATGAAGCTGCGCAATTCTGCGACCAGATGGTGCCGGATGGTAAGGGTGGAATGGAACCTCGATATCTATGCGACATGGTTGTACAGAACAAGGTTGAGGCCTACACACTAATTCGTGACATTTGCTCAATCTTTCGTGGACTGACTTTCTATGATGGAGAAAAGATTGGTATCGTGGTTGATAAACCTCGCAATCCATCTTACATCTTCACTAATGATAACGTTGTAAACGGATTATTCAGCCGCACTTTTGCCAGCGATAAAAGCCTTTACACTACGGCAAACGTTCAGTTTGATGATGTGGAGAACAACTATCAGCAGGATGTTGAGCCAGTATTTGAGCTCGAGGCTACTCGCCGATTTGGTTTTAACCCGGTCGACCTAACGGCAATTGGATGTACGCGAAGAAGTGAAGCAAACAGACGCGGAAGATGGCTACTGAAAACCAACCTGAGAAGCGAAACTATCAGCTTCACTACCGGGTTGGAAGGCATGATTCCGATGATTGGTGAGGTTATTGCGGTTAATGACGCTGCATGGTCGAGCAACTACCAGTTAAACCTTTCCGGTCGTATTGAATCAGTTCAGGGATTGCAGGTTTTCACCCCGTTCAAAGTTGACGCGGCACCGGGTGACAGAATTCTTCTGAACAAGCCTGACGGAAGCCCGGAAGCAAGAACTATCGCCAGCGTTTCGGAAGATGGTAGAACTATCAACCTGAATACTGCTTTTAGTTTTGTAGCTCAGCCTGACACTGTATTCGCAATCGATAAGGATAATCTGGCGCTTCAGCAGTATGTTGTGACAGGGATTCAAAAAGCAGATTCTGATGGTTCGGATTCATTCCAGTATACGATTACCGCGGTGGAGTATGACCCGAACAAGTATGACGAGATTGACTACGGCGTTAACATTGTTGACCGTCCAACTTCAATTGTGGAACCTGACAGATTATCGCCACCAGAAAACCTGACCGTGTCAAGTTATAGTAAGGTTGTTCAGGGCTTGTCGGTTGAGACGATGGTTATCGGATGGGATAAGGCTCCATACGCTAAAACCTACAATGTTCAATGGAGGAAAGAAAATGGTAACTGGATTAACGTACCCAGAACAGCAAGTACAGAGGTTGATATCGAAGGTATTTACGCAGGAATCTATGACGTTAGGGTTCGCAGCGTATCAGATACTGAAAACGTGTCTGCCTGGTCTGACATTGTAACTGTATCACTAACTGGCAAGATTGGTCGTCCCTCTGCACCTACGGTTATCACGGCATCAAATGATGAAGTATTTGGTATCCGTGTTAAGTGGGGTTTCCCTTATGGCTCTGGCGATACTGCTTATACTGAACTTCAGCAGGTTCCTGATAATGGTGACGGTACTTACAATCCTGACAATGCAAGTTTGCTTACATTACTTCCGTATCCAGCTTATGAATACTGGCACACGCCAATTCAGCCAGGTAAGGTTATCTGGTATCGGGCGAGACTGATTGACAGAATCGGAAATACGTCTGATTGGTCTAATTTCTCAAGAGGCATGAGTACTGACGACGCCAACATTATCAATGATTACATCAAGGTTGATATTGAGGGTTCTGAAGGATTCAAATACCTCGAGCAGAATGCGATTCAAAAGAATCAGGACATTCAGAATCAGGCAGAGTCAATTCTTGAGAACGCATTAGCTAATGATACTGATGTTCGCCGCATGACTAAGGAGAATGGCAAACGTAAGGCTGAATATGTTCAGGCGGTGAATCTCATAGCTGATGAAACTCAGGCGCGTGTAGAAGCTCTAACGCAGCTTAAGGCGCAAATTGATGATGAGGTCGTTGCATCAATTACTGAAGTTCAGACAGCGTTAGCAACCGAGACGGAGGCAAGAACTACCTCCGACACTCAGCTATCAGCAAGAATTGGTGATAACGAGGCAGCGTTAAACCAGAAGCTGGACGCTTTTGCTAACGCCACATCGACTGGCGTACAGTACGGGATTAGCCTTGGCCTGAAATACAATGGGCAGACTTATTCATCCGGGATGAGCATGGAGCTTGTTGGCACCGGTGGGAATGTTCGCAGCCAGTTCATTTTTGACGCAAACAGATTCGCGATCAGTAACGGCATTGGCTCTGGTTCCGGTCAGTGGCAGCTCCCCTTCGTTGTCGAGAACGGAAACGTAATCATCCAGAGCGCAGTTATCGGTGATGGTTCAATCAGCAACGCGAAGATTGGTAACTTTATTCAGTCGAATAACTATGTGGCAGGAACTACGGGTTGGAGGATTGATAAATCAGGAAGTGCAGAGTTAAGCAACGCCACTGTAAGAGGTAATCTTTACGCTAACAATGGCAACTTCGCATTTAACGGAACCAATAACACGGTTCAGATTAACAATAACGGAATCACTGTAAACTTACCGAACGGAGGAAGAGTGGTAGTTGGAGTGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6beea48c786de03582eaec060a34834bea4b0fb5655bfa9e6fc0eb817e3c244a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8587
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50