Protein

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Genbank accession
YP_010079202.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNSQNPFPSGDSCCGTNYDMTVDQLLGNAYQVVKFVAMRMPFIKTVSDNIDKVIAIVAALDKLKELEAKLPELLALHEKLAELMKLYTHLNELLLISSNMTQLLTVHDNLPQINAIYDNLSKVQTVAADITKIVTVADNINAVKNLDTNMAAILNVNNNLTVVKNVSDNMVDVRNVSSNMVQVKDVSAYMAEILAVYAKLGDLELLATQLDEVLTKFTDLADSGGSAMVGFIQNGTGTVTRTSQEKMRETISAADFGATGEGDAYDVELQNALNAAAGKKLEIGPGMYKLVTTDALLVPSNTTVILHPQAVIHQTQKGKKAAIAALPGSHDISICGGKLIGPYYQGFPQWVGRQNTVLDNGDNWNDHLAHNIGIDLRGRMYQREVLGYSLAQMQALTDEMHSITIFNTEIYGFGQSAIIADNITGFYADKLHLHDCGRDGLRMYGVRDGYITRPLVHDLLLGKDGAYPNWNVYGISCTRVYGKTGYPDPDLRIGRPTERVSVENFNIYNCFNWKSLDTHGGRRLRFINGTIRNSYIGIGVDSGGSGDAGVAPPIDVTIGGVQFISDSGAKYKRAGIAAFASGTNNDGRIGLGNGLNIFGCTFDGYGGDNFDAALSISNFRNVNVGTTHFKNFSRAAIFMSQICEDINIGAGVSMDGPKNYMTIVPSNGGSGYTSAPDVIVTGGDGTKLEAIAYITNGSVSSVDIIYMSNDWTVAPTISFSGGGGSGAAANATIFPGRGVIVGSATCSGTMTGVTMRNSDPAMSGAWGVEFVSAPAPNYGFKVSNDVGFYGHFSERVRNFRYEGGGTFQRVPIAQVRCTPAGVPTGGYGVASVSKSGTGEYVVTLSNSQATSPNQINPEATIYNTPNTLVRARADSATQITVQTTNLSSNFEDASFMLTVWANQGVLGQ
Physico‐chemical
properties
protein length:908 AA
molecular weight: 97031,25870 Da
isoelectric point:5,46003
aromaticity:0,08040
hydropathy:-0,08029

Domains

Domains [InterPro]
DC_0265
STR
1–424
DC_0265 DC_0155
Coil
Unmapped
56–83
Coil IPR012334
IPR011050
STR
248–637
IPR011050
YP_010079202.1
1 908
Architecture
STR
STR 1-905 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010079202.1
1 908
Domain Start End Length (AA) Confidence
N-terminal 1 259 259 0,9412
Central domain 260 795 537 0,9906
C-terminal 796 908 112 0,9826
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-259
Central
260-795
C-terminal
796-908

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AxyP_19-32_Axy24
[NCBI] 		2591048 Uroviricota > Caudoviricetes > Schitoviridae > Dongdastvirus > Dongdastvirus Axy24
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010079202.1 [NCBI]
Genbank nucleotide accession
NC_054969.1 [NCBI]
CDS location
range 65805 -> 68531
strand -
CDS
ATGAACTCCCAAAATCCGTTCCCCAGTGGTGATAGCTGCTGCGGAACCAATTACGATATGACGGTGGACCAACTGCTGGGTAATGCCTATCAGGTGGTCAAGTTCGTCGCCATGCGTATGCCGTTTATCAAGACGGTCAGCGATAACATCGACAAGGTTATCGCCATCGTTGCTGCTCTGGACAAGCTGAAGGAACTGGAAGCCAAGCTTCCGGAACTGCTGGCTCTCCATGAGAAGCTGGCTGAATTGATGAAGCTGTACACGCACCTGAATGAGCTGCTGTTGATTTCCAGCAACATGACTCAGCTTCTGACGGTGCATGACAACCTGCCCCAGATCAATGCCATCTACGACAATCTGTCGAAGGTGCAGACTGTTGCTGCTGATATCACCAAGATCGTCACGGTCGCTGACAACATCAATGCCGTGAAGAACCTGGACACCAACATGGCGGCCATCCTGAACGTGAACAACAACCTGACGGTTGTGAAGAACGTTTCGGACAACATGGTTGACGTGCGTAACGTGTCGTCCAACATGGTTCAGGTCAAGGATGTTTCGGCTTACATGGCCGAAATCCTGGCTGTCTACGCCAAGCTGGGTGATCTCGAACTGCTCGCTACTCAACTTGATGAAGTGCTGACGAAGTTCACTGATCTGGCTGATTCCGGTGGTTCGGCTATGGTTGGTTTTATCCAGAATGGCACTGGTACCGTAACTCGTACTTCTCAAGAAAAAATGCGTGAAACCATCAGTGCTGCTGATTTTGGAGCAACTGGCGAAGGTGACGCATATGATGTGGAGTTGCAGAACGCTCTCAATGCTGCTGCGGGAAAGAAGTTGGAAATCGGGCCGGGCATGTATAAGCTGGTTACTACCGATGCTCTGTTGGTTCCTTCCAACACTACTGTGATTCTTCACCCTCAGGCTGTAATTCATCAGACCCAAAAGGGCAAGAAAGCTGCAATTGCGGCTTTGCCGGGAAGCCACGATATCTCAATTTGCGGGGGCAAGCTGATTGGTCCTTATTACCAAGGCTTTCCTCAGTGGGTCGGACGGCAAAATACTGTTTTGGACAACGGTGATAATTGGAATGACCATCTGGCTCACAACATTGGTATCGACCTCCGGGGTCGAATGTACCAACGTGAAGTGCTGGGATACAGTCTTGCTCAAATGCAGGCACTCACTGATGAGATGCACAGCATCACTATTTTCAATACGGAAATTTATGGCTTTGGCCAGAGTGCCATCATCGCTGACAACATCACCGGTTTCTACGCCGATAAATTGCATCTGCATGATTGCGGACGGGACGGTCTGCGCATGTACGGTGTCCGAGATGGCTATATTACTCGTCCTTTGGTTCATGATCTGCTGCTTGGTAAAGATGGCGCATATCCGAACTGGAACGTTTATGGTATCTCTTGCACTCGTGTATACGGCAAAACCGGGTATCCTGATCCTGATCTGCGTATCGGCCGTCCTACGGAGCGTGTTTCTGTTGAAAACTTCAACATCTACAATTGCTTCAATTGGAAATCGCTAGACACGCACGGTGGCCGGCGGCTGCGATTCATTAACGGAACAATCCGAAATTCCTATATCGGAATAGGCGTCGATAGCGGTGGTAGCGGCGATGCCGGTGTCGCACCTCCTATCGACGTGACGATTGGCGGTGTTCAATTCATCTCCGACTCTGGTGCGAAGTACAAACGGGCGGGTATCGCTGCATTCGCCTCGGGCACCAACAATGACGGGCGAATCGGGCTTGGAAACGGGCTGAATATCTTCGGCTGCACATTTGATGGCTACGGCGGCGATAACTTCGATGCGGCGCTGTCGATCTCGAACTTCCGCAACGTCAATGTGGGGACCACCCATTTTAAGAACTTCTCTCGTGCAGCTATTTTTATGTCTCAAATCTGTGAAGACATCAATATTGGTGCGGGTGTTTCAATGGATGGTCCTAAAAATTACATGACCATTGTTCCTTCTAATGGAGGATCCGGGTACACCTCTGCCCCTGATGTCATTGTTACTGGTGGAGATGGGACCAAACTTGAAGCCATTGCGTATATTACGAATGGTTCCGTCAGTTCGGTGGATATCATCTATATGTCCAATGATTGGACTGTAGCGCCCACGATTAGTTTTTCTGGGGGTGGTGGCAGTGGTGCAGCTGCCAATGCCACGATATTCCCTGGCCGTGGTGTTATTGTTGGTTCTGCAACTTGTTCGGGAACCATGACCGGCGTCACTATGCGTAATAGTGATCCCGCAATGTCGGGTGCTTGGGGGGTCGAGTTTGTTAGTGCTCCTGCTCCGAATTATGGATTCAAAGTGTCCAATGACGTTGGGTTCTACGGCCATTTTTCTGAGAGGGTTCGCAATTTCCGCTATGAAGGCGGGGGAACGTTCCAACGAGTTCCTATTGCGCAGGTTCGCTGTACTCCTGCTGGTGTTCCTACTGGTGGATATGGGGTGGCTTCTGTCAGTAAATCTGGAACTGGGGAATACGTCGTGACGCTGTCAAACAGTCAAGCAACGTCCCCCAATCAGATCAATCCTGAGGCAACCATCTACAACACTCCGAATACTCTTGTCCGAGCAAGGGCAGACTCTGCTACTCAAATAACGGTACAAACTACCAATTTGAGTTCCAACTTTGAAGATGCATCTTTTATGCTGACGGTGTGGGCAAACCAAGGCGTACTTGGGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2cb04296cd978c3e1beef037ebe6c85ac6c0a94830f1d09d17b7647c00f261f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7369
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of sixteen phages from Abidjan, cote d'Ivoire, isolated on a single strain of Achromobacter xylosoxidans Essoh,C., Vernadet,J.-P., Vergnaud,G. and Pourcel,C. 2020-01-02 — GenBank