Protein

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Genbank accession
QVW56628.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEQKYYTLLTTIGKASIANATALGNKVDLVKLQLGDGAGAEYNPTEEQTSLKNVVWEGSINNVKIDEENPNWIVIETVIPGSVGGFMIREVGIFDSKEQLIAVSKYPETYKPTADSGSVKDLVIKIILVVSNTSSVNLKVDPTVILATLKDIQDLDTKIDTTKTELTSNIETAKTELNTRIGDTTQLTTTDKTNIVSALNEVKSSVDSIETTAEKTSIKDADNLFESGNVEGALKEVMQEVKGNRSSIISTVNNNLIPM
Physico‐chemical
properties
protein length:260 AA
molecular weight: 28127,42370 Da
isoelectric point:4,61654
aromaticity:0,03846
hydropathy:-0,21154

Domains

Domains [InterPro]
DC_1371
STR
1–256
DC_1371
IPR022225
ATT
3–150
IPR022225
IPR051934
Unmapped
4–171
IPR051934
QVW56628.1
1 260
Architecture
ATT
STR
ATT 1-150 | STR 151-256 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridioides phage CD1801
[NCBI] 		2803369 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW56628.1 [NCBI]
Genbank nucleotide accession
MW512570.1 [NCBI]
CDS location
range 21428 -> 22210
strand +
CDS
TTGGCAGAACAAAAATATTATACACTTTTGACAACGATAGGAAAGGCATCTATTGCAAATGCGACAGCTTTAGGCAATAAAGTAGATTTAGTTAAATTACAGCTTGGTGACGGAGCAGGGGCAGAATATAATCCAACGGAAGAACAAACTTCTCTAAAAAACGTAGTTTGGGAAGGTTCTATAAATAATGTAAAGATAGACGAAGAAAATCCAAACTGGATAGTAATAGAAACTGTAATCCCAGGTAGTGTGGGTGGCTTTATGATAAGAGAAGTAGGGATATTTGATTCAAAAGAACAACTAATTGCAGTATCTAAATATCCAGAAACGTACAAACCAACTGCTGACTCGGGGAGTGTAAAAGACTTAGTTATAAAAATTATTTTAGTAGTTTCTAATACTTCAAGTGTAAATTTGAAAGTAGACCCAACAGTAATTTTAGCAACTTTAAAAGACATACAAGACTTAGACACTAAAATTGATACAACTAAAACAGAATTAACAAGCAACATAGAAACTGCTAAAACAGAGCTGAACACTAGAATAGGGGATACAACACAACTTACTACAACAGATAAAACAAATATAGTTAGTGCATTAAATGAGGTAAAAAGTAGTGTAGATAGCATAGAAACAACAGCAGAGAAAACAAGTATAAAAGATGCAGATAATTTATTTGAAAGTGGCAATGTAGAGGGAGCATTAAAAGAAGTGATGCAAGAAGTAAAAGGTAATAGAAGTAGTATTATATCAACAGTAAATAATAATTTGATACCAATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
4b1043d801fe64b8bdb277addfbb5b5f542ea94657655835bcba0ba69b716d1c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9064
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Novel Bacteriophage with Broad Host Range against Clostridioides difficile Ribotype 078 Supports SlpA as the Likely Phage Receptor Whittle,M.J., Bilverstone,T.W., van Esveld,R.J., Lucke,A.C., Lister,M.M., Kuehne,S.A. and Minton,N.P. 2022 35107319 GenBank