Protein

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Genbank accession
YP_010081800.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MKLKLSNVFRDFKKDVESNFKEIDKLLTELLDIKSKTSNKYLDSLIDTLFTKRYDQLQKEIRAIVLPEMSPLAITEDYEKSLSDLKGERHTSLKSRLDADLNQIKSQSQKTANDDRFIVTENGTIFADFVKKSKTIKSVKKIGIIGDSVAKGSKSNKNFGKYLSEKLGATVQNEAVSGATMSTVKANSIYEQASKIRNKDLVIIQGTDDDWLYNGSSGVQIGTSKTNEKTFYGAFCKTVELIKSNNPKAKILVMTATRQLPVNGTTIRRKDTDKNSLGLDLEAYVNAQVLACSELNVPVFDAYHTDLLDPYNPAFRVKNMVDGLHPNELGHEVITHELLKNYYYFYG
Physico‐chemical
properties
protein length:347 AA
molecular weight: 39024,97800 Da
isoelectric point:8,91548
aromaticity:0,08069
hydropathy:-0,48271

Domains

Domains [InterPro]
DC_0665
ATT
1–105
DC_0665 IPR051532
SSF52266
STR
135–340
SSF52266
IPR036514
STR
135–346
IPR036514
IPR036514
STR
137–346
IPR036514
cd00229
ENZ
142–340
cd00229
IPR013830
ENZ
145–332
IPR013830
YP_010081800.1
1 347
Architecture
ATT
STR
ATT 1-105 | STR 135-346 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SP197
[NCBI] 		2495554 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010081800.1 [NCBI]
Genbank nucleotide accession
NC_055022.1 [NCBI]
CDS location
range 25008 -> 26051
strand +
CDS
ATGAAGTTAAAGTTATCAAACGTGTTTCGTGATTTCAAAAAAGATGTCGAAAGTAATTTTAAAGAAATTGATAAGTTACTGACTGAGTTACTCGACATCAAAAGTAAAACAAGTAATAAGTATTTAGACAGTTTAATTGATACGCTTTTTACTAAACGATATGATCAACTGCAAAAAGAAATCAGAGCGATTGTTTTACCTGAAATGTCACCTCTTGCTATTACAGAGGATTATGAAAAGAGTTTAAGTGATTTAAAAGGGGAGCGACATACATCACTCAAATCACGATTAGATGCAGATTTAAATCAAATTAAAAGTCAATCTCAAAAGACTGCTAATGATGATAGATTTATCGTGACTGAAAACGGTACAATCTTTGCTGATTTTGTTAAAAAGTCAAAGACAATCAAAAGTGTTAAAAAAATTGGGATTATTGGTGATTCTGTCGCAAAAGGTAGTAAATCAAATAAAAACTTTGGTAAATACCTGTCTGAAAAGTTAGGTGCTACTGTACAGAATGAAGCGGTAAGCGGTGCGACTATGTCAACAGTCAAGGCTAATTCCATTTATGAACAAGCTTCAAAAATCAGAAATAAGGATTTAGTTATCATTCAAGGTACTGATGACGATTGGTTATACAACGGCTCGTCAGGTGTTCAAATTGGAACAAGTAAAACAAATGAAAAAACGTTTTACGGTGCGTTTTGTAAAACAGTTGAATTGATTAAATCTAACAATCCTAAAGCTAAGATTCTTGTGATGACTGCAACGCGTCAATTGCCGGTTAATGGCACGACAATTAGACGTAAAGACACCGATAAGAATAGTCTAGGGCTTGATTTAGAAGCGTATGTAAATGCGCAAGTGCTTGCGTGTTCAGAACTTAATGTACCGGTTTTTGATGCATACCACACAGACTTATTAGATCCATATAATCCTGCTTTCAGAGTTAAAAACATGGTTGATGGATTGCATCCGAACGAGCTCGGACACGAAGTAATTACACATGAACTGTTAAAAAATTACTACTATTTTTACGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
52b7e543821ad40c351dd8a80c874902c10f97143331f490cbb5f5ca61ee10b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8063
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Staphylococcus phage SP197 Azam,A.H., Arai,H., Miyanaga,K. and Tanji,Y. 2019-04-17 — GenBank