Protein

View in Explore

Genbank accession

YP_009605451.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,86

Evidence RBPdetect2

Probability 0,93

Protein sequence

MADNTPLPISGLPAGAAIDGTELVPVVQQGKTVKIPASALKGLQGDKGDQGLKGDKGDKGDKGDTGDAGAKGTDGTNGVDGKDGTSVTPKGNIDLIANLPATSTKGDMYFVREDGHLYISNGTTFVDQGKIKGEDGNDGAKGDTGAKGDKGDKGDTGDQGIGFNPKGEVPTAADLPTASNTLGDTYIAVDEGALYVWAENAGTSSFVKLGAVKGAKGDKGDKGDKGDTGAKGDAGAKGADGAKGDKGDKGDKGDTGDVGPRGVGINMIDRLDDVSQLPDPADYTQGDTFVIAGHYWTLYNGAFIDLGNMTGPQGKSTYDLWLEDGNTGSVTDFINSQKGADGIGLQIRGSFTSTADLPTSGQINGDAYIIEQQMYVWDGTQWSIVGQVGPKGDKGDKGDKGDTGAKGDKGDTGPKGDTGLKGDKGDKGDKGDQGEKGEMGAGVQIMGKLTDASELPATGELGQGYLINGEFYGWTGSAYENLGPIQGPKGDQGLKGDTGAKGDKGDQGDVGPKGDAGAAGKDGTNGVDGAKGDTGAKGDKGDKGDTGAGLMIKGTVADASALPTTGSAEGDAYVVGENLYVYITGSFQDMGPFRGEKGDKGDTGAKGADGAKGDTGAKGDKGDTGAKGADGTGLLPKGTVANSAALPASGNTVNDMYYAGGHTYIWNGTTWVDFGSNQGPKGDTGLKGDTGATGAKGDTGAKGDKGDKGDQGVQGDVGPQGESVVIRGHVDTVGALPTTGVVKGSVYTVTDDMIIYSWDGTQFVAAGSIRGPKGDQGVQGEKGDMGAGIKILGKKATVGDLPATADNPGDGYMIGTDFYVWDGAEFVNVGPIQGPKGDTGARGLTGAKGDQGDKGNKGDKGDPGTKWIVFARDPNSADGVVGDYFLNSSSQAFFQKTSTTAWSQLGTLGGGNVFDANFDGKAKVRKDGQWIDLVIVFDKYDLAVLDVTGTTLDISKNNCFRFAGTTDRTITFSGMPSSARAEPVVLIVSGKGGSFTWGNTILWSRGESVALGDNLTIITLLWTGTQFIGQVSMSA

Physico‐chemical properties

protein length:	1035 AA
molecular weight:	104733,42910 Da
isoelectric point:	4,58517
aromaticity:	0,06570
hydropathy:	-0,54773

Domains

Domains [InterPro]

DC_1340
STR
10–152

DC_1340 IPR008160 DC_1065 IPR008160 DC_1340

IPR008160
STR
42–85

IPR008160 DC_1340 IPR050149

DC_0385
STR
217–338

DC_0385 IPR008160 DC_1065 IPR008160

DC_1340
STR
410–530

DC_1340 DC_0114

YP_009605451.1

1 1035

Architecture

STR

RBD

STR 10-722 | RBD 723-1035

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1340	STR	DC_1340	10	152	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	42	85	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	132	243	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	214	262	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_0385	STR	DC_0385	217	338	Novel HMM	DC_0385	Central	Low	Positional only	38 proteins / 38 hits
DC_1065	STR	DC_1065	322	437	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
IPR050149	Unmapped	-	380	865	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	386	441	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	410	530	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	487	544	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1065	STR	DC_1065	528	631	Novel HMM	DC_1065	Central	Low	Positional only	109 proteins / 109 hits
DC_1340	STR	DC_1340	606	707	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	678	722	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_0114	RBD	DC_0114	699	1035	Novel HMM	DC_0114	C-terminal	Low	Positional only	42 proteins / 42 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage vB_EamM_Deimos-Minion [NCBI]	1815986	Uroviricota > Caudoviricetes > Chimalliviridae > Agricanvirus deimos >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

YP_009605451.1 [NCBI]

Genbank nucleotide accession

NC_041972.1 [NCBI]

CDS location

range 254853 -> 257960
strand -

CDS

ATGGCCGATAATACTCCACTGCCGATTAGTGGGTTGCCAGCAGGCGCAGCTATCGACGGTACCGAATTGGTTCCTGTGGTCCAGCAGGGGAAAACGGTTAAGATCCCTGCCAGTGCACTAAAGGGTCTGCAGGGTGATAAAGGCGACCAAGGTCTCAAAGGAGACAAGGGCGACAAAGGCGATAAAGGTGACACTGGCGATGCCGGTGCAAAAGGTACCGATGGTACCAACGGTGTTGACGGTAAAGACGGCACTAGTGTTACACCAAAAGGCAACATCGACCTGATTGCTAATCTGCCTGCCACCTCTACAAAAGGCGATATGTATTTTGTTCGTGAAGATGGTCACCTGTACATCTCGAACGGCACCACTTTTGTAGATCAAGGCAAAATCAAAGGCGAAGATGGTAACGACGGCGCCAAGGGCGACACGGGTGCTAAAGGTGATAAAGGGGACAAGGGTGATACCGGCGATCAGGGTATTGGCTTTAACCCAAAAGGTGAAGTCCCAACCGCCGCCGACCTCCCGACTGCCAGCAACACCCTCGGTGACACGTATATTGCCGTAGATGAAGGTGCGCTGTATGTTTGGGCTGAGAACGCCGGTACTTCTTCTTTTGTTAAGCTCGGTGCGGTAAAAGGCGCGAAGGGCGACAAGGGAGATAAAGGGGATAAAGGCGACACCGGAGCCAAAGGTGATGCCGGTGCGAAGGGTGCTGATGGTGCCAAAGGTGATAAAGGCGACAAGGGTGACAAAGGAGATACTGGTGATGTAGGTCCGCGTGGTGTCGGGATCAACATGATCGATCGCCTGGACGACGTCTCTCAGTTACCTGATCCGGCTGATTACACCCAGGGCGACACCTTTGTCATCGCGGGTCACTACTGGACTCTGTATAACGGCGCGTTCATCGACCTCGGTAACATGACTGGCCCGCAAGGTAAATCTACCTATGATCTGTGGCTGGAAGATGGTAACACTGGTTCGGTCACCGACTTCATCAATTCGCAGAAAGGTGCGGATGGTATCGGTCTGCAGATCCGTGGTTCCTTTACTTCTACCGCCGACCTACCAACCTCTGGCCAGATCAATGGTGACGCATACATCATCGAGCAGCAGATGTATGTGTGGGACGGTACGCAGTGGTCTATTGTCGGTCAGGTCGGTCCAAAAGGTGACAAGGGCGATAAAGGCGACAAGGGTGATACCGGAGCCAAAGGTGATAAAGGCGACACTGGTCCAAAAGGTGATACTGGCCTGAAAGGTGACAAGGGCGATAAGGGTGATAAAGGTGATCAGGGCGAGAAAGGCGAGATGGGTGCCGGCGTTCAGATCATGGGTAAACTCACTGACGCTTCTGAATTACCGGCTACTGGCGAACTGGGTCAAGGTTATCTGATCAACGGCGAGTTCTATGGCTGGACAGGCAGCGCCTATGAAAACCTCGGTCCAATCCAAGGTCCAAAAGGCGATCAGGGTCTGAAGGGTGATACTGGTGCCAAAGGGGATAAGGGTGACCAGGGTGATGTCGGCCCGAAAGGTGATGCCGGTGCAGCGGGTAAAGACGGCACCAACGGCGTTGACGGTGCCAAAGGGGATACCGGAGCCAAAGGTGACAAGGGCGATAAAGGTGACACCGGTGCAGGTCTGATGATCAAAGGCACCGTTGCTGATGCGTCTGCATTACCGACTACCGGCAGTGCTGAAGGTGATGCCTACGTCGTGGGTGAAAACCTGTACGTTTACATTACGGGTAGCTTCCAGGATATGGGGCCGTTCCGTGGTGAGAAAGGTGACAAGGGCGACACGGGTGCTAAAGGTGCTGATGGTGCTAAGGGCGACACCGGTGCGAAGGGTGATAAGGGTGATACTGGTGCCAAGGGTGCCGACGGTACTGGTCTGTTACCAAAAGGTACAGTAGCGAACTCTGCGGCGTTACCAGCCTCTGGCAATACGGTCAATGACATGTATTACGCAGGCGGCCACACTTACATCTGGAACGGCACTACCTGGGTTGACTTTGGTTCCAACCAAGGCCCGAAAGGTGATACTGGCCTGAAAGGTGACACCGGCGCAACAGGTGCTAAAGGTGATACCGGAGCCAAAGGTGATAAAGGCGACAAAGGTGATCAGGGTGTTCAAGGCGATGTCGGTCCGCAGGGTGAGAGTGTTGTCATCCGTGGTCATGTTGATACCGTGGGTGCACTGCCAACCACCGGTGTAGTGAAAGGTTCTGTCTACACTGTGACTGATGACATGATCATCTACTCCTGGGATGGCACACAGTTCGTTGCCGCGGGTTCTATCCGTGGACCGAAAGGTGACCAAGGTGTCCAAGGTGAGAAAGGTGACATGGGTGCGGGTATCAAGATCCTTGGTAAGAAAGCAACTGTAGGCGATCTGCCTGCTACTGCCGACAACCCAGGTGACGGTTACATGATCGGTACCGACTTCTACGTTTGGGATGGTGCTGAGTTTGTAAACGTTGGCCCAATCCAAGGTCCTAAGGGCGATACTGGTGCGCGTGGTCTGACCGGTGCGAAGGGTGACCAGGGTGATAAGGGTAACAAAGGTGATAAAGGTGACCCAGGTACCAAATGGATCGTCTTTGCCCGTGACCCGAACTCTGCCGATGGTGTGGTGGGTGACTACTTCCTGAACTCCTCTAGCCAGGCGTTCTTCCAGAAGACCTCTACGACTGCATGGTCGCAGCTGGGTACCCTGGGTGGCGGTAACGTCTTCGATGCCAACTTCGACGGTAAAGCCAAAGTCCGTAAGGATGGTCAGTGGATCGATCTGGTCATTGTCTTTGACAAGTACGACCTGGCAGTTCTGGATGTGACAGGCACTACGCTTGACATCTCTAAGAACAACTGCTTCCGCTTTGCCGGTACTACTGATCGCACCATTACCTTCAGTGGTATGCCAAGCTCTGCGCGTGCAGAACCAGTCGTCCTGATCGTCTCAGGTAAAGGCGGTAGCTTTACGTGGGGTAACACCATCCTGTGGTCTCGTGGTGAGTCTGTTGCACTGGGCGATAACCTCACCATCATCACGCTGCTGTGGACGGGTACTCAGTTCATCGGCCAGGTATCAATGTCTGCCTAA

Genome Context

Tertiary structure

PDB ID

a31ca8243d16891933d4802fec6c73fb26d746a817d4c2f168c73b5f48b0fe80

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7046

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence