Protein

View in Explore

Genbank accession

XYA29641.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,95

Protein sequence

MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIAEAIDFFKDFNFEALQNLANQIKEDAESAESSAAAAAASENAAKTSEDNSKASEVAAETARDQVQQIINDAGEQSTLAVLAQPQGSSKVGFKNGGTLQDAIYWLMPEMFGAKGDGVTDDTVAIQAAINAAKNKALVFSNGKKYRTKNLTVPHPMTFCGLGRRQDGAIVPYGNVPDESFVHSGTLIGVTTSGTVTFYDLTVDARNIPLTSVDGQRLTGVGASDNNSGVYQSGLQMYNCNVSGFSGYNIYGGSSKSFGILKDCQSESSVKSCILIDGVDWRIDHCYVGRSIEGHGIEVLNENNAITNCDIYFNKLSGISYRQPTGMAFIKISCNTINSNGQHGISISLPYAQPAGTIIAENIFWNNSTELTGTYHNIYLNYGRGHIVFGNAHKAYQATDGSSSERCGYCVYLGNGATLSGPLMDAIDPLYSYISGAMNVKAESVFNQNEFTIGTGTIAKKLIAGDTSTAYEVWIPREAYPRLRIVAGKIYLGNGSAEPTHGIQQLAAYPNVTMGIKGLGVVGNYSDSPFRIGTFRLWSGGDNTIRSKFGADPTSATDGFVLSMKVDVPSSATSSGVAGQWAADNSYLYVCVASNTWRRTSIAAW

Physico‐chemical properties

protein length:	706 AA
molecular weight:	75197,19760 Da
isoelectric point:	5,29134
aromaticity:	0,08924
hydropathy:	-0,12975

Domains

Domains [InterPro]

DC_0313
STR
1–705

DC_0313

Coil
Unmapped
116–136

Coil IPR011050

IPR012334
STR
211–508

IPR012334

XYA29641.1

1 706

Architecture

STR

STR 1-705 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0313	STR	DC_0313	1	705	Novel HMM	DC_0313	Central	Low	Positional only	276 proteins / 276 hits
Coil	Unmapped	-	116	136	Coils	Coil	-	-	-	-
IPR011050	STR	IPR011050	206	487	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	211	508	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XYA29641.1

1 706

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	222	222	0,9898
Central domain	223	560	339	0,9809
C-terminal	561	706	145	0,8387

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-222

Central
223-560

C-terminal
561-706

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Klebsiella phage vB_KpnS-Uqbar [NCBI]	3447926	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Klebsiella pneumoniae [NCBI]	573	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XYA29641.1 [NCBI]

Genbank nucleotide accession

PV891805.1 [NCBI]

CDS location

range 41080 -> 43200
strand +

CDS

ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCAATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGACTACGCGATCCTGTTAAGCGACTCTCTGACCGTTGACGGACTGGCGCAAGATGTTGCGGAAACGCTGCGCTACTATCAGTCGCAGGAAACCGTAATTGCTGAGGCGATCGATTTCTTTAAGGATTTTAATTTCGAAGCGTTGCAAAATCTTGCTAACCAAATTAAGGAAGACGCTGAATCTGCGGAATCAAGTGCTGCGGCGGCTGCTGCATCTGAAAATGCGGCAAAAACTTCAGAGGATAACTCCAAGGCTTCAGAGGTGGCGGCGGAGACTGCAAGAGACCAAGTCCAGCAGATCATTAATGACGCTGGAGAACAGTCAACGCTGGCTGTCCTTGCGCAGCCGCAAGGTTCGAGTAAAGTTGGTTTTAAAAATGGTGGCACCTTGCAGGATGCAATATACTGGCTAATGCCTGAAATGTTCGGAGCTAAAGGTGACGGGGTTACAGACGATACAGTAGCAATACAGGCCGCCATCAATGCTGCGAAGAATAAAGCTCTTGTATTCAGTAACGGCAAAAAATACAGAACAAAAAACTTAACCGTTCCGCACCCAATGACATTTTGCGGTCTTGGCCGCAGGCAGGATGGCGCTATCGTGCCATATGGCAACGTGCCTGATGAATCTTTCGTACACTCTGGCACACTGATAGGTGTTACAACATCCGGGACGGTTACATTTTACGATCTGACGGTAGACGCCAGAAATATTCCATTAACCTCTGTTGATGGTCAGCGGCTTACCGGAGTTGGCGCATCAGATAATAATAGTGGTGTATACCAGTCTGGATTACAGATGTACAATTGCAACGTTTCTGGTTTTAGTGGGTACAATATTTATGGCGGTTCGTCGAAGTCATTCGGCATACTGAAAGATTGCCAGTCAGAAAGTTCAGTAAAGTCATGCATTCTAATTGATGGCGTTGACTGGAGGATTGATCACTGCTATGTCGGGCGGTCAATTGAAGGCCATGGTATCGAGGTTCTCAACGAGAACAATGCTATTACTAACTGTGACATTTATTTCAACAAACTGTCAGGGATCTCCTACCGTCAACCGACAGGAATGGCGTTCATCAAGATTTCTTGTAATACCATTAATAGTAATGGACAGCATGGTATCTCGATTTCACTACCTTACGCCCAACCTGCTGGCACTATTATTGCTGAAAACATTTTCTGGAATAATAGCACCGAACTAACGGGAACATACCACAACATATACCTAAACTATGGTCGTGGTCACATTGTCTTTGGCAACGCTCATAAGGCGTATCAGGCTACTGATGGTTCAAGCTCGGAGCGTTGCGGTTACTGCGTATACCTTGGCAATGGGGCTACGTTGTCTGGTCCGCTGATGGACGCCATCGACCCTCTGTATTCTTACATCAGTGGCGCAATGAACGTAAAGGCGGAAAGCGTTTTCAACCAGAATGAATTTACAATTGGTACAGGAACCATAGCCAAAAAGCTGATCGCTGGAGACACTTCAACCGCATATGAAGTATGGATCCCAAGAGAGGCCTATCCAAGACTGAGAATTGTCGCCGGGAAAATATATCTTGGCAATGGTAGCGCAGAACCAACACATGGCATCCAGCAGTTAGCTGCATATCCAAACGTCACGATGGGTATTAAAGGCTTAGGGGTTGTCGGAAACTACAGCGATTCACCTTTTCGCATCGGTACCTTTAGATTGTGGTCTGGAGGAGACAACACAATAAGAAGTAAGTTTGGCGCAGATCCAACATCTGCTACAGACGGTTTTGTTCTGTCTATGAAAGTTGATGTACCATCATCAGCAACATCTTCAGGAGTGGCGGGTCAATGGGCCGCTGATAATAGTTATCTTTATGTATGCGTTGCATCTAATACCTGGCGAAGAACATCAATCGCCGCTTGGTAG

Genome Context

Tertiary structure

PDB ID

e34b06c4279f498ca82ba37814cf80ffada473a4cbfb7ec846cd001824b92535

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,8302

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae	Cuello,L., Parmar,K., Supandy,A., Van Tyne,D. and Patel,R.	—	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature