Protein

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Genbank accession
XKC24406.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MAVTTKIIVQQILNIDDTKATASKFPRYTVTLGNSISSITASELVSSIEAAAKSAAAAKDSEIAAKTSELNAKNSEQEAAISAGASEASAAQSATSATQSAASADRSAESATAAKVSETNAKASETKAKTSETNAKVSETNAKSSETKAKTSETNAKTSETNAAASAAAAKISETNAKTSETRAAESAASAADSKGFRDEAEAFAAQAAASAAAAKVSETKAKTSETNAKSSETKAKASETNAASSATSASQSVTTIQGLKSDVEALKSDTQTIKNSAVTETTALKNQAATSATNAAASATEAGKQATNAANSANSAKTEADRSKTEADRAKAEADRSEAAINGTPELQPLPDVWIPFNDSLDMITGFSPSYKKIIIGDDEITMPGDKIVKFKRASTATYINKSGVFTVAEIDEPRFERDGLLIEGQRSNYILNSLTVSKWGASSWLTISSSGVDSFGFTYGRFDVQSSNVGSTTSGNIAVAPSPRAFDVTGDEKYCTISCRCKCESDIDIRCRLRFENYDGTATSFIGDAYMNMQTLDITTTGGAANRITAKAVKDNATGWIFFEATIKALDTENMIGGQVQIAPSQRVGSFADGDHIIVATPQFEGGATASSFIISDTVAATRASDMVTVPIKNNLYSLPFTVLCEVHKNWYKTPNAAPRVFDTGGHQTGAAIILGFGSSADYDGFPYCDIGGANRRVNENASLEKMVMGMRVKEDQMTCAVSNGRISSETKTTWTYIQSSATIRIGGQTTTGQRHLFGHVRNFRVWHKALTDRELKESV
Physico‐chemical
properties
protein length:782 AA
molecular weight: 82110,77870 Da
isoelectric point:5,73945
aromaticity:0,05754
hydropathy:-0,36803

Domains

Domains [InterPro]
DC_0608
ATT
2–207
DC_0608 DC_1979
Coil
Unmapped
314–341
Coil IPR013320
XKC24406.1
1 782
Architecture
ATT
STR
ATT 2-207 | STR 233-782
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC24406.1
1 782
Domain Start End Length (AA) Confidence
N-terminal 1 613 613 0,4289
Central domain 614 771 159 0,3976
C-terminal 772 782 10 0,9963
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-613
Central
614-771
C-terminal
772-782

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage HMD-P4
[NCBI] 		3374742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC24406.1 [NCBI]
Genbank nucleotide accession
PQ462666 [NCBI]
CDS location
range 80483 -> 82831
strand -
CDS
ATGGCAGTAACTACTAAAATTATCGTACAGCAGATATTAAATATTGATGATACTAAAGCTACTGCTAGTAAGTTTCCTAGATATACAGTAACTCTAGGTAACTCTATTAGTTCTATTACTGCAAGTGAGCTAGTATCGTCTATTGAGGCAGCAGCTAAGTCTGCTGCAGCTGCAAAAGATTCTGAGATAGCTGCTAAGACTTCAGAACTTAACGCTAAGAACTCTGAACAGGAGGCTGCTATTTCTGCTGGAGCTTCTGAAGCCTCTGCCGCTCAGTCCGCTACATCTGCTACTCAATCTGCTGCATCAGCGGATAGATCTGCAGAATCAGCCACAGCAGCTAAAGTATCTGAGACTAATGCGAAAGCTAGTGAAACTAAGGCTAAAACCTCAGAGACTAATGCAAAAGTATCAGAAACTAATGCAAAGTCTAGTGAAACCAAAGCTAAAACCTCGGAAACTAACGCTAAAACCAGTGAGACCAACGCTGCTGCTTCCGCTGCCGCTGCAAAAATTAGTGAAACTAATGCTAAGACTAGTGAAACTAGAGCTGCTGAATCTGCTGCGTCTGCTGCCGATTCTAAAGGTTTTAGGGATGAAGCGGAAGCATTTGCTGCACAAGCGGCTGCCTCTGCTGCGGCTGCTAAAGTATCCGAGACTAAGGCAAAAACATCAGAAACTAATGCAAAGTCTAGCGAAACTAAAGCTAAGGCTAGTGAAACAAATGCTGCTAGTTCTGCAACTTCAGCTAGTCAATCAGTAACCACTATTCAAGGTCTAAAATCTGATGTTGAGGCATTAAAATCTGATACTCAAACCATCAAGAATAGTGCTGTAACTGAGACAACAGCTTTAAAAAATCAAGCGGCTACTTCTGCAACTAATGCTGCTGCATCTGCTACTGAAGCGGGAAAACAAGCTACTAATGCTGCTAATAGTGCTAATAGTGCTAAAACTGAGGCTGACCGTTCAAAAACTGAAGCTGATCGTGCTAAAGCTGAAGCAGATAGATCTGAAGCTGCTATTAATGGTACTCCCGAGCTACAGCCATTACCGGATGTATGGATACCTTTTAATGACTCCTTAGATATGATTACTGGCTTCTCACCTAGCTATAAAAAGATTATAATTGGTGACGATGAAATTACAATGCCTGGTGACAAGATTGTTAAGTTTAAACGTGCATCAACTGCGACATATATTAATAAATCCGGCGTTTTCACTGTTGCGGAAATTGATGAACCACGTTTTGAACGTGATGGTCTGCTTATTGAAGGGCAAAGATCAAACTATATTCTTAACTCCCTTACTGTTTCTAAATGGGGTGCATCTTCGTGGTTGACAATCTCATCAAGCGGAGTTGATAGCTTTGGTTTTACATATGGCCGATTTGATGTTCAGTCTAGTAATGTTGGAAGCACAACATCAGGTAATATTGCTGTGGCTCCTTCACCAAGAGCATTTGACGTTACTGGTGATGAGAAGTATTGCACTATATCTTGCCGATGCAAATGTGAATCAGACATAGATATTCGATGTAGACTCAGATTTGAGAACTACGACGGGACTGCCACATCCTTCATTGGAGATGCGTACATGAATATGCAGACTTTAGATATAACAACTACAGGTGGCGCGGCAAATAGAATTACAGCTAAAGCGGTCAAGGATAATGCTACAGGATGGATATTTTTTGAAGCGACAATAAAAGCACTAGATACCGAAAATATGATTGGTGGTCAAGTTCAGATAGCACCATCTCAAAGAGTTGGATCTTTTGCAGATGGCGATCATATTATTGTTGCAACGCCGCAATTCGAAGGTGGGGCGACTGCATCGTCATTCATCATATCTGATACAGTTGCAGCGACAAGGGCTAGCGATATGGTGACAGTGCCAATTAAAAACAATCTTTATAGCTTACCTTTTACGGTTCTTTGTGAGGTACATAAGAATTGGTACAAAACACCGAACGCAGCACCTCGAGTTTTTGATACTGGAGGTCATCAAACCGGAGCGGCTATTATTCTTGGCTTCGGTTCTTCAGCAGATTACGACGGATTTCCTTATTGCGATATTGGAGGAGCTAACCGACGTGTAAACGAAAACGCATCGCTTGAAAAAATGGTCATGGGTATGCGTGTGAAGGAAGATCAGATGACATGTGCAGTAAGTAACGGGCGTATATCTAGTGAAACAAAGACAACTTGGACTTATATTCAAAGCTCTGCAACCATTCGTATTGGTGGTCAGACAACAACAGGTCAGCGTCATTTATTCGGGCATGTCAGAAATTTTCGAGTATGGCATAAAGCATTGACTGACCGTGAATTGAAGGAGTCTGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
db07d644e20f2d7e9986d65966ec909f6cf048481f09dfdd907aeb5780ac59f8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4154
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50