Protein

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Genbank accession
UVX29361.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MSIPTIRISELPPSSTLVDTDLLVVEQADETKKTTLNQFVSDMNISRDTMFSDDDGASLIGTSTGRDVEESIRAASGNSQALFPLLINKLTAYRHGASGQTQFLLYGFGSSVGNGATLPDPSTQAPVAKFFEFFNKAVNKGSIYPLSFVNKSVNGSTINNFLANQWPDVVNSGVYPDIALFVYGMNDFPTANYNAGQTFNENGFKQRLRTAIRNVRDAGGDVVLTTTPHPNIPIYSWSMPPGVAQVWPSPSPAPVSDDSIIPSAAESNVDLVWNGVTITVGHRFLRGNDAIRQIAVEMGCVLIDVEKYWFDALAKYGISALFNSGQTVHPNLLGHQESYWLAFEEFFANMDKNGWIAPDAGKKDLFEVGGTGSYPNPKEADVDLQSNGVRSYSFVLRDKFSRKIEHVSQVGEVTRWSYTSQEPTTSSPGYNLQWIEYHTRTKGLYAAGDTQLITIPNRTTKKIFIDVWTSAQTSWAQAVELIATNREGVVTYTVIGNHDQTPGTGSATGGSRLFTLSTVDGTTDGGIVVSITTNNSSLKYRIVGFGT
Physico‐chemical
properties
protein length:547 AA
molecular weight: 59580,75340 Da
isoelectric point:5,21176
aromaticity:0,10238
hydropathy:-0,23218

Domains

Domains [InterPro]
DC_1918
ATT
1–247
DC_1918 DC_1009
IPR036514
STR
106–352
IPR036514
SSF52266
STR
108–344
SSF52266
UVX29361.1
1 547
Architecture
ATT
STR
RBD
ATT 1-247 | STR 248-352 | RBD 353-547
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVX29361.1
1 547
Domain Start End Length (AA) Confidence
N-terminal 1 94 94 0,8165
Central domain 95 293 200 0,3685
C-terminal 294 547 253 0,8365
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-94
Central
95-293
C-terminal
294-547

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiM5b
[NCBI] 		2951234 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVX29361.1 [NCBI]
Genbank nucleotide accession
ON602729.1 [NCBI]
CDS location
range 53646 -> 55289
strand -
CDS
ATGTCAATACCAACCATAAGGATCTCGGAACTTCCTCCTTCCTCTACACTTGTTGATACAGATTTGCTGGTCGTAGAGCAAGCGGATGAAACAAAAAAGACAACCTTAAATCAGTTTGTTTCTGATATGAATATATCTAGAGACACGATGTTCTCTGATGATGATGGTGCGAGCCTTATAGGTACTAGCACAGGGAGGGACGTTGAGGAATCTATCAGAGCAGCATCTGGTAATTCTCAAGCACTATTCCCATTATTGATTAATAAATTAACTGCATACCGTCATGGAGCCTCCGGTCAGACACAGTTCTTACTCTATGGGTTTGGGTCTTCAGTGGGGAATGGTGCAACATTGCCAGATCCTTCCACACAAGCCCCTGTGGCAAAATTCTTTGAGTTCTTTAATAAGGCTGTTAATAAAGGATCAATCTATCCTCTATCTTTTGTTAATAAATCAGTTAACGGTTCCACGATCAACAATTTTTTAGCTAACCAGTGGCCCGATGTAGTAAATTCTGGAGTGTATCCAGACATCGCCCTATTCGTATATGGAATGAATGACTTCCCTACCGCCAATTACAATGCTGGGCAAACCTTCAACGAGAATGGATTTAAGCAGAGGTTGCGGACAGCAATCAGAAATGTTAGAGATGCAGGTGGTGATGTTGTTCTTACTACCACCCCGCACCCTAATATTCCCATTTATTCTTGGAGTATGCCCCCCGGTGTCGCGCAAGTATGGCCATCCCCTTCACCAGCTCCCGTGTCTGATGATAGTATCATCCCTTCCGCTGCCGAGTCAAATGTAGATTTGGTATGGAATGGCGTGACCATTACGGTGGGCCATCGTTTCTTGCGAGGAAACGATGCTATTCGCCAGATCGCTGTAGAAATGGGTTGTGTTCTTATCGATGTCGAAAAATATTGGTTTGATGCCCTTGCCAAGTATGGTATTAGCGCATTGTTTAACAGTGGGCAAACTGTTCACCCTAACCTTCTGGGGCATCAGGAATCATATTGGCTTGCATTCGAGGAATTCTTTGCCAACATGGATAAAAATGGATGGATTGCACCGGATGCTGGCAAAAAAGATCTGTTCGAAGTAGGTGGTACGGGGAGCTACCCAAATCCTAAAGAGGCTGACGTAGACCTCCAAAGCAATGGTGTGAGATCTTATAGTTTCGTGCTGAGAGATAAGTTTTCAAGAAAGATTGAGCATGTTAGCCAAGTTGGGGAGGTAACACGATGGTCCTACACATCTCAAGAACCGACAACTTCCAGTCCTGGTTATAATCTGCAATGGATTGAATATCACACTAGGACTAAAGGGCTTTATGCCGCGGGGGATACTCAACTTATCACCATACCGAACCGGACAACCAAGAAAATTTTTATCGATGTTTGGACCTCTGCTCAAACAAGTTGGGCGCAGGCTGTTGAACTGATTGCTACTAACCGGGAAGGGGTGGTAACTTATACGGTTATCGGCAATCATGACCAGACACCAGGCACTGGTTCTGCGACAGGGGGTTCAAGACTCTTTACCTTGTCCACAGTAGATGGGACAACCGATGGGGGTATAGTTGTCTCCATCACAACCAATAATTCATCTTTGAAGTATAGAATTGTTGGCTTTGGAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e52ff8deea7d3f92605293d9a2d1925252ea2da725a064638de159a0fb4444e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6537
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank