Protein

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Genbank accession
YP_009966775.1 [GenBank]
Protein name
structural protein with Ig domain
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MPTITVLVAPEVVRNKPETERNHVVTGVAKGWQKTSLNQDPDEILTECKGLDALLTKSNLQADGVTKVDPTKPVGFQVSYEIHDPTAVLTTGLTITPATASGEIGQIVELLATVAPTNATYQGVNWYSGDLTKAIHIGSGKFKLLQSGSVTVYGVTVEGNHTDSTVITVAGLLSLTTDLTATKDVTAVQDGTFSVVAAGGTTPYTYVWYFSDVPGGAGAVIDASANTTAATANLVITAVEASDEGEYWCVVSDADGHSVTSTRCEMAVV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 28009,02360 Da
isoelectric point:4,51685
aromaticity:0,05948
hydropathy:0,09033

Domains

Domains [InterPro]
DC_0078
STR
1–192
DC_0078 cd00096
G3DSA:2.60.40.1080
STR
86–170
G3DSA:2.60.40.1080 IPR013783
IPR003343
STR
91–162
IPR003343 IPR007110
IPR003599
STR
97–269
IPR003599
DC_2066
RBD
166–269
DC_2066
PF13927
STR
185–252
PF13927
IPR036179
RBD
191–259
IPR036179
YP_009966775.1
1 269
Architecture
STR
STR 1-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Se-J
[NCBI] 		2698910 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009966775.1 [NCBI]
Genbank nucleotide accession
NC_049497 [NCBI]
CDS location
range 28842 -> 29651
strand -
CDS
ATGCCAACAATCACAGTATTAGTCGCGCCGGAAGTTGTACGCAACAAACCGGAAACCGAACGCAATCATGTCGTGACGGGTGTTGCAAAGGGTTGGCAAAAAACCAGCCTGAACCAAGATCCTGATGAAATCTTGACCGAATGTAAAGGTCTTGATGCGTTGCTTACCAAAAGCAATCTGCAAGCGGACGGTGTCACCAAAGTTGATCCGACAAAGCCAGTAGGTTTCCAGGTTTCTTATGAAATCCATGATCCGACTGCTGTTCTGACCACGGGTCTGACCATTACTCCGGCTACTGCCAGCGGGGAAATAGGCCAAATCGTTGAATTGCTGGCCACTGTTGCCCCTACGAACGCAACATATCAAGGGGTTAACTGGTATTCTGGCGACCTGACGAAGGCGATTCATATCGGCAGTGGTAAATTCAAACTGCTTCAGTCTGGTTCTGTTACAGTCTATGGCGTTACCGTTGAAGGCAATCACACCGATTCTACCGTCATTACCGTCGCAGGGTTGTTGTCTTTGACAACTGACCTCACCGCCACCAAAGATGTTACTGCTGTTCAGGATGGCACTTTTAGCGTTGTGGCTGCGGGTGGGACAACCCCTTACACTTATGTGTGGTACTTCTCTGATGTTCCTGGCGGCGCGGGTGCGGTGATTGATGCCAGTGCCAACACGACTGCTGCTACTGCCAATTTGGTCATCACCGCAGTTGAAGCATCAGATGAAGGCGAATATTGGTGTGTAGTTTCTGATGCGGATGGTCATTCTGTAACATCCACCCGTTGTGAAATGGCTGTGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c0a13d08af7a364f220338214b0463475d86dece838f49e904c9d71cbf133d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7067
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50