Protein

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Genbank accession
YP_009814687.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSAKYTRITVTPDIGEALQVGAKAPFVVNLSQSISGVTIEELTKVSSEVKKDALSASNSAKAAKVSETNAKTSADSSAKSAQNAKASADAAKISETNAKGSADSAESSLNELKSHTYDKGTIDSKLGEKVNKSGDIMEGPLETTTKVLAKSANRQHSLGFVSSNSGSTNIEKVQDGETYLIRVPQKTGTMLLEGDYGIGGRQVLGSADLNDIKIPGDYQQDRSAEATRARNYPINTAGYLNVKQTVNGWGNGCMQQYHLYSGVGYFQRTWNGSQWSNWERFMTRGDYGIGNSSVSNTSPPQETIQDALSIQDTRFAVSSGGDATNYAEPYSPLLSMARFGGADSTGKVVHAQYYEINGFPEHVFRIRNLGKWSGWYHTMILNHGGVQKLNGSLVAINNRIGANPLSATRDGNDYLNIYPPKSTDGTDVGFFQYNRDKVWNGMLKIPRVPIGGTETILTDGINYGTGRVLSFKADYKDKASYIESIWVDNSFRWRIGSMDATSEFQINTGGGARFHLTKDSLTVNGKKVLDNVTPNTVKKQDINRNGFYQCQDIEPYNVMFMGVACTHVANDQYVFSMWGRGNRFLFSTKEAGSWHGTWEVWTTANARADTNGFIKKASPIIDINPDGTFTTNDESEGAAVTRVAQGEYLIEGVLGFNSDAGWGGADGGIEIPLDVNKQPLIWVDYKVMEDGSILIKTYHRTHPSAPKFARNDIAGYSDGDPIDIPNGRFISVRVQMPEQSIYNVRMRELEESSTLYEKYHKPIEEAWENKPEYINDVMDKFLNI
Physico‐chemical
properties
protein length:784 AA
molecular weight: 86137,75790 Da
isoelectric point:5,90866
aromaticity:0,09439
hydropathy:-0,53253

Domains

Domains [InterPro]
DC_0709
STR
4–769
DC_0709
cd19958
STR
201–281
cd19958 IPR058008
YP_009814687.1
1 784
Architecture
STR
STR 4-769 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009814687.1
1 784
Domain Start End Length (AA) Confidence
N-terminal 1 742 742 0,1978
Central domain 743 773 32 0,7648
C-terminal 774 784 10 0,1920
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-742
Central
743-773
C-terminal
774-784

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage Stubb
[NCBI] 		2315597 Uroviricota > Caudoviricetes > Demerecviridae > Novosibvirus stubb >
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009814687.1 [NCBI]
Genbank nucleotide accession
NC_048086.1 [NCBI]
CDS location
range 76455 -> 78809
strand -
CDS
ATGAGTGCTAAATATACAAGAATAACAGTGACTCCCGATATTGGGGAAGCACTACAAGTAGGGGCGAAAGCCCCATTTGTAGTTAACTTATCTCAATCTATATCAGGAGTAACAATAGAAGAACTTACCAAGGTGTCTTCAGAAGTAAAGAAAGATGCCTTATCGGCTAGTAACTCAGCTAAAGCAGCTAAGGTTTCAGAAACCAATGCTAAGACCAGTGCTGATAGTTCTGCTAAGTCAGCGCAAAATGCTAAGGCTTCGGCTGATGCAGCTAAGATTTCTGAGACTAACGCTAAAGGTAGTGCTGATAGTGCAGAGTCATCCCTAAATGAGCTAAAATCTCATACGTATGATAAAGGTACTATAGATTCCAAACTAGGCGAGAAAGTTAATAAGTCTGGTGATATTATGGAAGGGCCTCTAGAAACAACAACCAAAGTGTTAGCTAAATCCGCAAACAGACAACATTCATTAGGTTTTGTAAGTAGTAATTCAGGGTCTACAAATATAGAGAAAGTACAGGACGGAGAAACCTACTTAATACGTGTTCCTCAAAAAACCGGTACAATGTTACTAGAGGGAGACTACGGGATTGGTGGTAGACAGGTACTAGGGTCCGCTGACCTAAACGACATAAAAATTCCTGGTGACTACCAACAAGATAGAAGTGCAGAGGCAACGAGAGCTAGAAACTACCCAATAAACACAGCTGGTTACTTAAATGTTAAACAAACAGTAAATGGCTGGGGTAATGGCTGTATGCAACAATACCACTTGTACTCAGGAGTAGGGTACTTCCAAAGAACATGGAATGGATCTCAGTGGTCTAATTGGGAAAGATTTATGACCAGGGGTGATTATGGTATAGGGAATAGTTCTGTTAGTAACACAAGTCCACCTCAAGAAACTATTCAGGATGCACTATCTATACAGGATACAAGATTTGCTGTTTCTTCAGGGGGGGATGCCACCAATTACGCAGAGCCCTACTCACCTCTACTAAGTATGGCTAGATTTGGTGGCGCCGATAGCACTGGCAAGGTAGTACACGCCCAGTACTATGAAATTAACGGTTTTCCTGAGCATGTTTTTAGAATAAGAAACCTGGGTAAGTGGTCCGGGTGGTATCACACAATGATACTAAATCACGGAGGGGTTCAAAAACTAAACGGTAGTTTAGTGGCTATAAATAACAGAATAGGTGCAAATCCATTATCTGCTACTAGAGACGGTAATGATTACTTGAACATATACCCACCAAAGTCTACAGATGGTACTGATGTTGGATTTTTCCAATATAATCGCGATAAGGTATGGAATGGTATGTTAAAGATACCCCGAGTGCCTATCGGAGGAACCGAAACAATACTTACAGACGGTATAAATTATGGCACAGGAAGAGTTTTGTCTTTTAAAGCAGATTATAAAGATAAAGCTAGTTATATTGAGTCGATATGGGTTGATAACTCTTTTCGATGGAGAATTGGGTCAATGGATGCCACGTCTGAATTCCAAATAAATACAGGTGGTGGAGCTAGGTTTCATCTAACTAAAGATAGTCTCACTGTTAACGGTAAGAAGGTTCTTGATAACGTAACACCTAATACCGTTAAAAAACAGGACATAAATAGGAATGGGTTTTATCAATGCCAAGATATTGAGCCCTATAATGTAATGTTCATGGGAGTTGCTTGTACTCATGTAGCTAATGACCAGTATGTTTTTTCTATGTGGGGTCGTGGTAACCGATTTTTATTTAGTACGAAAGAAGCAGGAAGCTGGCATGGTACTTGGGAGGTATGGACAACAGCAAATGCGAGAGCCGATACGAATGGTTTTATAAAAAAAGCCTCACCAATTATCGACATCAACCCCGATGGAACATTCACCACTAACGATGAATCAGAGGGTGCTGCAGTTACTAGAGTAGCCCAGGGTGAGTATCTTATTGAGGGTGTACTCGGCTTTAACTCAGATGCAGGTTGGGGGGGTGCTGATGGCGGTATTGAAATTCCACTTGATGTGAATAAACAGCCATTAATTTGGGTAGACTATAAAGTTATGGAAGATGGGTCTATTCTTATTAAGACGTATCATAGGACTCACCCTAGTGCACCTAAGTTCGCTCGTAATGATATTGCTGGTTACAGCGATGGTGATCCAATCGATATACCAAACGGTCGTTTTATTTCCGTTCGTGTACAGATGCCTGAGCAATCGATCTATAATGTGAGAATGCGTGAACTAGAGGAGTCTAGTACTCTCTATGAAAAGTATCATAAACCAATAGAGGAGGCTTGGGAAAATAAACCAGAGTACATAAATGATGTAATGGATAAATTCCTGAACATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
703db55df47c352bc3c9627efb3f2309c7699c7ac86e0a73e38bcdbe43e705fe
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50