Protein

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Genbank accession
AFM54801.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYKWTLKHREENGANRLNPREVKQGVYMDTNSGQLIQLDTYATSGMMPVTPAQQYQGHSPTSEVFRKVVFFNTAKELVSGIDSWVSTFTVPSGCYYAVVSFRSISHNNTQPEEVGATLGLGSAFEPYFVSKQVQPIYKSMERGYDLESNYQFYREKLKGNLKLVRDDYDYVAALSFDTKIYIDIEDLNGVLPVYKGQFYKTDCKWDGDDRILEVKTEPADDYVEIMAGLEKTFNLIKIAPELEAITVRRRPLIQVYIPGDTVVTNLLGGTYWEQEIQDEPVFDHNTLVQTYKFANPKNIRIVPAAFGAGLSTDITGEYDDNRLNANGLYRLIEEANTVYPSFTRYRYKIQRVSDDVILYETGFTNWRESGVNLLPFNGVNGETGQFYFTEYRIYVRYYTDLLNVRGTDTYAVPNEDIVANNRNYRRVIGYNIDSFYIYDQFTDTPTQYGRVPDDAPNGGKYYKQFLVSVTTGLSQPQPVSSSNWRAVSLWFFNTLDIRYTEFIDGQDFKLRDAYTLHGTIKALLREVGSNVTHDNSTQYSEFLYSANNPLGGFTFLDFNGGTIATDYEGNITHFLTPKSNIIAGEYDQPAQKAEITLGQVLNMLRDVYRVFWHIENGKLRFEHISWYQNGGTYGAPIVGADLTLLKQPRNGKSWGFSQNKWAFDKENMPERFEFGWMDDVSPPFDGSPIQIRSNYVQLGRIEDLAVNGITTDIDFVMGNAQEISKDGFCLISAVVRGGIYRVPFIEMELGYNEQVIMQNGLLSWTYLHPKFHVYDLPSDKANINGDDVTLFQNNTRQKKQEVTYPANQGINPYQLVRTQLGDGIIDKLMVSMESYIVKATIKHDTD
Physico‐chemical
properties
protein length:846 AA
molecular weight: 96713,19570 Da
isoelectric point:5,07177
aromaticity:0,13239
hydropathy:-0,43889

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFM54801.1
1 846
Domain Start End Length (AA) Confidence
N-terminal 1 56 56 0,8265
Central domain 57 340 285 0,2545
C-terminal 341 846 505 0,1911
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-56
Central
57-340
C-terminal
341-846

Taxonomy

  Name Taxonomy ID Lineage
Phage Croceibacter phage P2559S
[NCBI] 		1176422 No lineage information
Host Croceibacter atlanticus HTCC2559
[NCBI] 		216432 Bacteria > Bacteroidetes > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Croceibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFM54801.1 [NCBI]
Genbank nucleotide accession
JQ867099 [NCBI]
CDS location
range 18798 -> 21338
strand +
CDS
ATGTATAAATGGACTTTAAAGCATAGGGAAGAAAACGGAGCGAACAGGCTTAACCCAAGGGAAGTAAAGCAGGGCGTTTATATGGACACCAATAGCGGGCAGCTTATACAGCTTGATACTTACGCTACAAGTGGAATGATGCCAGTAACACCTGCACAGCAATACCAAGGGCATAGCCCTACGTCCGAAGTGTTTAGGAAAGTAGTATTTTTTAATACCGCTAAGGAATTGGTAAGCGGCATCGATAGCTGGGTAAGTACCTTTACTGTGCCATCGGGTTGCTACTATGCCGTAGTAAGCTTTAGAAGTATTTCGCATAACAATACCCAGCCCGAGGAAGTAGGTGCAACCTTGGGGCTGGGTTCTGCGTTTGAACCGTACTTTGTAAGTAAGCAGGTGCAGCCAATTTACAAGTCAATGGAAAGGGGCTACGATTTGGAAAGCAATTACCAATTTTACAGGGAAAAGCTTAAGGGTAATTTAAAGCTGGTGCGTGATGATTACGACTATGTAGCAGCGTTAAGTTTTGATACTAAAATTTACATAGATATTGAAGACCTTAACGGGGTGCTGCCTGTGTATAAAGGGCAGTTTTATAAAACAGACTGCAAGTGGGACGGGGACGATAGAATACTGGAAGTAAAAACCGAGCCAGCTGATGATTATGTGGAAATAATGGCAGGGCTGGAAAAGACTTTTAACCTTATAAAGATTGCGCCCGAACTTGAAGCAATTACTGTACGTCGCCGACCACTTATACAGGTTTACATACCAGGGGACACCGTGGTAACTAATTTACTGGGTGGTACGTACTGGGAACAGGAAATACAAGACGAGCCAGTATTCGACCATAACACGCTTGTACAGACTTACAAATTTGCAAACCCTAAAAACATACGTATAGTGCCTGCGGCTTTTGGGGCTGGTTTAAGTACAGATATTACTGGCGAATACGACGATAACCGTTTAAATGCAAACGGGCTTTATAGGCTTATAGAGGAAGCGAATACAGTTTACCCAAGTTTTACACGGTACAGGTACAAGATACAGCGTGTGAGCGATGATGTTATTTTGTATGAAACTGGGTTTACTAACTGGCGGGAAAGCGGTGTAAACCTTTTGCCGTTCAATGGAGTAAACGGGGAAACTGGGCAATTCTATTTCACAGAATACCGTATTTACGTGCGTTATTATACCGACTTGCTTAATGTAAGAGGAACAGATACGTATGCAGTACCTAATGAGGATATAGTTGCAAATAATAGAAATTACCGCCGTGTAATTGGTTACAATATTGATAGCTTCTACATATACGACCAGTTTACTGATACGCCTACACAGTACGGGCGTGTTCCCGATGATGCGCCAAACGGCGGCAAGTATTATAAGCAGTTTTTAGTTTCAGTAACTACGGGGCTAAGCCAGCCGCAGCCAGTATCATCAAGTAACTGGCGTGCTGTATCGCTTTGGTTTTTTAATACGCTTGATATACGTTACACGGAATTTATAGACGGGCAGGATTTTAAGCTGCGTGATGCTTATACGCTGCACGGTACTATAAAGGCACTACTTAGGGAGGTAGGCAGCAACGTAACGCACGACAATAGTACACAGTACAGCGAATTTCTATACAGCGCAAACAACCCGCTGGGCGGCTTTACTTTTTTAGATTTTAACGGCGGCACTATTGCCACAGATTACGAGGGGAATATAACACACTTTTTAACGCCTAAAAGCAATATAATAGCAGGCGAGTATGACCAACCAGCACAAAAGGCGGAAATTACGCTGGGGCAGGTGCTTAATATGCTGCGTGATGTTTACCGTGTATTTTGGCATATAGAAAACGGGAAACTGCGCTTTGAGCATATTAGCTGGTATCAAAACGGCGGTACTTATGGTGCGCCAATAGTAGGGGCAGACTTAACGCTTTTAAAGCAGCCACGTAACGGCAAAAGCTGGGGCTTTAGTCAAAACAAATGGGCTTTTGATAAGGAAAATATGCCCGAACGTTTTGAATTTGGCTGGATGGATGATGTAAGCCCGCCGTTTGACGGCAGCCCTATACAGATACGCAGTAATTACGTGCAGCTGGGTAGGATAGAAGATTTGGCAGTAAACGGTATCACTACGGATATCGACTTTGTAATGGGTAACGCACAGGAAATAAGCAAAGACGGCTTTTGCCTTATTAGTGCAGTAGTAAGGGGCGGGATATACCGTGTGCCTTTTATAGAAATGGAACTGGGCTATAATGAGCAGGTAATAATGCAAAATGGGCTTTTAAGCTGGACGTACCTGCACCCTAAATTCCACGTTTACGATTTACCCTCTGATAAGGCAAATATTAACGGCGATGATGTAACGTTGTTTCAAAACAATACACGCCAAAAAAAGCAGGAAGTAACCTACCCAGCAAACCAAGGAATAAACCCGTACCAGCTTGTAAGAACGCAGCTTGGGGACGGTATTATTGATAAGCTTATGGTAAGTATGGAAAGTTATATAGTAAAAGCAACAATTAAACACGATACGGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c9e1af09ceb80706b7edc534d5047a000c53762f7788dc1d005fb747bd8b4b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4722
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Croceibacter Bacteriophage P2559S Kang,I., Kang,D. and Cho,J.C. 2012 22843867 GenBank