Protein

View in Explore
Genbank accession
YP_024817.1 [GenBank]
Protein name
Pas31
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPIDLTQIKKKILPPQDGQDELKLRVGTVAAIDAAGLVTLTLNGVAVPGVPSLSGARFAVGTVVQVLSYRGSLLIIGAGNSATAQPVEATGSTTNGTYASGSYGNSLTTTGIHGVAFIAPPSGKIQIIGRAMGGNNNAGSYTQLDYEVRQGSTVGSGTVVRTTNNNTAGIHQSATASAQGTIVTGGLFSGLVPGAAYNACLTYATGGAGTASYNRRQIAVYPQ
Physico‐chemical
properties
protein length:223 AA
molecular weight: 22386,89350 Da
isoelectric point:9,47700
aromaticity:0,05381
hydropathy:0,09417

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_024817.1
1 223
Domain Start End Length (AA) Confidence
N-terminal 1 74 74 0,7222
Central domain 75 212 139 0,0004
C-terminal 213 223 10 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-74
Central
75-212
C-terminal
213-223

Taxonomy

  Name Taxonomy ID Lineage
Phage Actinoplanes phage phiAsp2
[NCBI] 		279303 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Actinoplanes sp. SN223/29
[NCBI] 		442459 Bacteria > Actinobacteria > Actinobacteria > Micromonosporales > Micromonosporaceae > Actinoplanes

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_024817.1 [NCBI]
Genbank nucleotide accession
NC_005885 [NCBI]
CDS location
range 27063 -> 27734
strand +
CDS
ATGCCGATCGACCTCACCCAGATCAAGAAGAAGATCCTGCCTCCCCAGGACGGCCAGGACGAACTCAAGTTGCGCGTGGGCACCGTGGCGGCCATCGACGCGGCCGGACTCGTCACGCTCACGCTCAACGGCGTGGCCGTGCCCGGTGTGCCCTCGCTGTCCGGCGCGCGGTTCGCCGTGGGGACCGTGGTCCAGGTGCTCAGCTACCGGGGGTCGCTGCTGATCATCGGTGCCGGGAACTCGGCCACGGCTCAGCCGGTGGAGGCGACCGGCTCCACGACGAACGGCACGTACGCCAGCGGCTCGTACGGGAACTCGCTGACCACCACCGGCATCCACGGCGTGGCGTTCATCGCGCCGCCGTCCGGCAAGATCCAGATCATCGGCCGGGCGATGGGCGGCAACAACAACGCCGGGTCATACACCCAACTGGACTACGAGGTCCGCCAGGGCTCCACCGTGGGTTCGGGGACCGTGGTCCGGACGACCAACAACAACACGGCCGGTATCCACCAGAGCGCCACGGCGAGCGCCCAGGGGACGATCGTGACCGGCGGGCTGTTCTCCGGTCTGGTCCCCGGCGCGGCGTACAACGCTTGCCTGACGTACGCCACCGGCGGCGCTGGGACGGCCTCGTACAACCGGCGACAGATCGCGGTCTATCCCCAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
034fe0a51369cb14bab4df56128940b5b2c11a0fdd95edb822fa039e53827831
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8293
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50