Protein

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UniProt accession
A0A0D4DC21 [UniProt]
Protein name
Long tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MSEFRRAFRASGLDASGQNVINVADPRANELFDGINQGYFIEENTVQEYDPTRDHYKVDFIVEFNQRLYKNITEINAPEPFDSQKWQKMRTDPEWEDTDSSVGANVGDFLLLTASSAITITLPETPLTGDTVTIKDGKGVLTTYPCTIAAAGGLTIQHYAIDGSIESKPSISFNTPNSTIFLVYNGIAWTYQINQELYNTYIDDSHPTQQGGYLSTGGYFTNVGETVTYDGSVKKIAISVPLNPNVGDTIHLKDVAYLENQTSIQIGVNPTATGQVIQDPISGERSSVISLDTIGGADITFIDDNGTGVWVITIANNPHLWNYVGDSSAVELKPRSRYAIEIADAVPAMTITLPEKPADGDWIEISHNKTAHKKVTIQVHPNFGDDDPGHGPDEYKVFLDFETYRYQKYRHYVDFVPFFVESFEISDYDSGYSLVLYYDASRKVWSFGNIATRIDIADELYRKRPGIVPLADPTEALAHGIEYAHPEDAADPWADQNPLKDHVITVETLDARRAGEQQVGMARVATLGTDEALEESRSGTFVRYPDTNFRHDLFITPRSLNARTATETRRGVVEIATQNETRSTTNDVQVLTPMKFHAAQAEEDLTGVAKLVEASNNINAGGIVTSTANMRSDRSVNGIDNTVYDKTDHLRIVTPKMLDEYRATENQPGTLWIAKSSELRINDSTVDNAIITPKKLAAWKASSTVRGIARSATQSEANATTGTGESWTTVFITPETLNSRTATESRRGVAEIATQTEVDSGTDDTRIVSPLKLKTWLDRDHFVTAGTDGLSHTGTVWGDVTFSIASATETQRGTLQVATQAEANAQTGALDDVIITPQKLNARRATETQTGIVRLATQAEVEAATASTEIVVTPSDLLHWTRYSDSSRANEARYGNVQIATPAETFVGNSTDGSTQAYTSYLRVPYAVSPYGLHYALRNYLPLNAKADDSELLDGLNSTQFARSDVSDTISGVYTFTENEIKIQGANPRIEFTDTTDANSTLELYYQSGKVGFTDGVDNWLLRVANDGNTNVYGALTTDSTITAGSSITENEASANVDATYGTYSSPATGSLRSKYLGINNVAKASEKWVTARTVTFTGDLSGNFTLDGSGNVTSNIQVNDYSHAHSGENITTGTINNDRLRKSSRTNSGIVQVTSDVRTADPVNASDPHQALSAGAGKTLSERIDLFTPDGGTGESVKYRDYIQVGSVRMSTNNQGVLEFTYGHAI
Physico‐chemical
properties
protein length:1227 AA
molecular weight: 133861,56140 Da
isoelectric point:4,77353
aromaticity:0,08231
hydropathy:-0,42478

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A0D4DC21
1 1227
Domain Start End Length (AA) Confidence
N-terminal 1 380 380 0,8337
Central domain 381 768 389 0,0882
C-terminal 769 1227 458 0,2580
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-380
Central
381-768
C-terminal
769-1227

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ValKK3
[NCBI] 		1610855 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus valkk3
Host Vibrio alginolyticus NBRC 15630 = ATCC 17749
[NCBI] 		1219076 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJT61103.1 [NCBI]
Genbank nucleotide accession
KP671755 [NCBI]
CDS location
range 134477 -> 138160
strand +
CDS
ATGTCAGAATTCCGCAGAGCATTTCGTGCGTCAGGTCTTGATGCAAGTGGTCAGAATGTCATTAACGTAGCAGACCCACGAGCAAATGAATTGTTCGACGGTATTAACCAAGGCTACTTTATTGAAGAGAACACTGTTCAAGAGTATGACCCAACACGAGATCACTATAAAGTAGACTTTATCGTTGAGTTCAATCAACGTCTATACAAAAACATTACCGAAATCAATGCACCTGAACCTTTTGACTCGCAGAAGTGGCAGAAAATGCGTACCGACCCTGAATGGGAAGATACTGATTCATCGGTAGGCGCAAACGTCGGTGACTTCTTGTTGTTAACAGCAAGCTCGGCAATCACTATTACACTGCCTGAAACACCATTAACAGGTGACACAGTTACAATCAAAGACGGTAAAGGCGTTCTTACAACTTACCCTTGTACGATTGCAGCAGCGGGCGGCTTGACGATTCAACATTACGCCATTGACGGTTCAATTGAGTCTAAACCGAGTATTTCATTCAATACCCCTAACAGCACTATATTCTTAGTGTACAACGGTATTGCATGGACATATCAGATCAATCAAGAGTTATACAATACGTATATTGACGACAGTCACCCAACTCAACAGGGTGGGTACTTATCAACTGGTGGTTATTTCACTAACGTTGGCGAGACAGTCACATATGACGGTTCAGTTAAGAAAATTGCAATTTCTGTACCACTGAACCCGAACGTGGGCGATACAATTCATCTTAAAGATGTTGCGTATCTTGAGAATCAAACGTCGATTCAAATCGGTGTGAACCCGACTGCTACGGGTCAGGTTATTCAAGACCCTATTTCAGGCGAACGTAGTTCTGTTATCAGTCTTGATACTATCGGCGGCGCTGATATCACATTTATCGATGACAACGGTACTGGCGTATGGGTAATCACAATCGCGAACAACCCGCATTTATGGAACTATGTCGGGGATTCAAGCGCGGTTGAATTGAAGCCTCGTTCTCGTTACGCTATCGAAATCGCAGATGCTGTTCCTGCAATGACGATCACACTACCAGAAAAACCAGCCGATGGTGACTGGATTGAGATCTCACACAACAAAACAGCTCATAAGAAAGTAACGATTCAAGTTCATCCGAATTTCGGTGATGATGACCCAGGTCACGGCCCCGATGAATACAAAGTATTCTTGGACTTTGAAACATATCGTTATCAAAAATACCGTCATTACGTTGATTTCGTTCCATTCTTCGTTGAATCATTCGAAATTAGTGATTATGACAGCGGTTATTCACTAGTTCTATACTACGACGCGAGTCGTAAAGTATGGTCGTTCGGTAACATCGCGACTCGTATCGATATCGCTGATGAACTATACCGTAAACGCCCGGGTATCGTGCCATTAGCTGACCCAACGGAAGCTCTAGCACACGGGATTGAATATGCGCACCCTGAAGATGCAGCAGACCCTTGGGCTGATCAAAACCCACTGAAAGATCACGTAATCACGGTAGAGACGCTTGACGCTCGTCGTGCAGGTGAACAGCAAGTCGGTATGGCTCGTGTTGCTACTCTTGGAACTGATGAAGCTCTTGAAGAATCGCGTTCTGGTACGTTTGTTCGTTACCCAGATACAAACTTCAGACATGATCTGTTCATAACACCACGTAGCTTGAATGCGCGTACAGCAACTGAAACACGTCGCGGTGTAGTTGAAATCGCAACTCAAAACGAGACGCGAAGCACAACTAACGATGTTCAAGTTCTAACACCGATGAAATTCCACGCTGCACAAGCTGAAGAAGATCTAACAGGTGTTGCGAAACTAGTCGAAGCGTCGAACAACATCAATGCTGGTGGTATTGTTACATCAACAGCGAATATGCGTTCAGACCGTTCAGTAAATGGTATTGACAATACAGTATATGATAAAACTGATCATCTGCGTATCGTAACGCCTAAAATGCTTGATGAGTATCGCGCTACAGAGAATCAACCTGGTACATTATGGATTGCTAAGAGTAGTGAACTTCGCATCAACGACTCAACAGTTGATAACGCGATCATCACGCCTAAGAAATTAGCAGCGTGGAAAGCAAGCTCAACGGTTCGTGGTATTGCTCGTTCTGCTACACAATCTGAAGCAAATGCAACAACAGGAACTGGTGAATCGTGGACAACAGTCTTCATCACACCAGAAACGTTGAATAGCAGAACAGCAACTGAATCACGTCGTGGTGTTGCTGAAATCGCCACCCAAACTGAAGTTGACTCAGGTACAGACGATACTCGTATTGTTTCACCACTTAAACTGAAGACATGGCTTGACCGTGATCATTTCGTGACAGCAGGAACAGATGGTCTATCGCATACTGGTACAGTATGGGGCGACGTTACATTCAGCATCGCGTCAGCGACTGAAACACAACGTGGTACACTACAAGTTGCGACTCAAGCAGAAGCGAATGCTCAAACTGGTGCGCTTGATGATGTAATAATCACACCACAGAAGTTAAATGCGCGTCGTGCTACAGAAACACAAACTGGTATTGTACGTCTTGCAACTCAAGCTGAAGTAGAAGCGGCTACGGCAAGTACTGAAATTGTTGTTACCCCTAGTGATTTGCTTCACTGGACTAGATACTCTGATAGTTCACGTGCAAATGAAGCTCGATACGGTAATGTACAAATTGCAACGCCAGCAGAAACGTTCGTAGGTAACAGCACAGACGGTTCAACGCAAGCATATACTTCGTACTTGCGCGTTCCATATGCAGTATCACCTTACGGGTTACACTATGCATTGCGTAACTACTTGCCATTAAACGCTAAAGCTGATGACTCAGAATTACTAGATGGCTTGAACAGTACACAATTTGCACGCAGTGACGTTTCAGATACTATCTCAGGTGTTTACACATTCACAGAGAATGAAATTAAAATTCAGGGCGCAAACCCTCGAATCGAATTCACTGATACGACTGATGCAAACAGCACGCTTGAGCTTTACTACCAGTCTGGCAAGGTCGGGTTTACTGATGGGGTTGACAACTGGTTGCTTAGAGTAGCTAATGACGGTAATACTAACGTTTACGGTGCATTGACAACTGACAGCACGATAACAGCAGGTTCAAGTATCACTGAAAACGAAGCAAGCGCAAACGTTGATGCAACATACGGGACTTATTCAAGCCCTGCAACAGGTTCACTTCGTAGCAAGTACTTGGGTATTAACAACGTGGCTAAAGCTTCTGAGAAGTGGGTTACAGCGCGTACAGTGACGTTCACTGGCGACTTGTCCGGTAACTTTACGTTAGATGGTAGCGGAAACGTTACTTCAAACATTCAAGTTAACGATTATAGTCACGCTCACTCAGGTGAGAACATCACAACTGGTACAATTAACAATGATCGTTTGCGCAAATCAAGCCGCACGAATTCAGGTATTGTACAAGTAACAAGTGACGTGCGTACAGCAGACCCAGTGAATGCTTCAGACCCACACCAAGCTCTATCGGCTGGTGCTGGTAAGACTCTATCTGAGCGTATCGACTTGTTCACGCCAGACGGTGGTACAGGTGAGAGCGTTAAATACAGAGACTACATTCAAGTTGGTTCTGTAAGAATGTCAACTAATAATCAAGGCGTGTTGGAGTTTACGTACGGACACGCTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5038116e4c6446e792c34973ce53d7869c0dde14fdc7b93235bf2283b7232b18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5458
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50