Protein

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Genbank accession
YP_009288926.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MADPILMAAFGEDFVETRILSEANSVKYWLKAYATHSNAVPNKPELNINGAFDMTSSLRRGINVVQVNGDRFINFKTFDVTTDDNNTNNKAFIEYANGLSSGLYVIMTHERFQSSPLIDRWFKNKWSASWPGSDFSKSFPNSAYVGVLGAAKGRILIESFYGNDGKVKEDSRAKVDTVYDNVGDVGYTGCPYRSIEDTNEYSDSTGYEYKRYPVQNEAISKIADYGLSPGDSVFLVCDMYASKSLLDAGSTTRASLRWFKGTSLLSSNVSLEIPKNGADRWLRFERFTAVPTDADGFTIVVSRYPKTSVVGDSKIKNLVFVQTSHGEQLNSVIQEFGVNGIRMNKGVEGGTTVIMELPNSKVDPSGVIPVQSFRETSD
Physico‐chemical
properties
protein length:378 AA
molecular weight: 41801,22380 Da
isoelectric point:5,46680
aromaticity:0,11111
hydropathy:-0,34868

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009288926.1
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,4449
Central domain 145 367 224 0,3863
C-terminal 368 378 10 0,2327
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-367
C-terminal
368-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_KpV477
[NCBI] 		1852625 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Jiaodavirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009288926.1 [NCBI]
Genbank nucleotide accession
NC_031087 [NCBI]
CDS location
range 152686 -> 153822
strand +
CDS
ATGGCTGATCCAATTTTAATGGCAGCCTTTGGTGAGGATTTCGTGGAAACACGAATCCTCTCTGAGGCAAATTCTGTGAAGTATTGGCTAAAAGCTTATGCTACACATTCTAATGCTGTTCCGAACAAGCCAGAATTGAATATTAACGGTGCTTTTGATATGACCTCCTCCTTACGGAGGGGGATTAATGTTGTTCAAGTTAATGGTGACAGATTTATTAATTTTAAAACATTTGACGTTACCACTGATGATAACAACACTAATAACAAAGCATTTATAGAATATGCAAACGGATTAAGTTCAGGATTGTATGTTATAATGACCCATGAACGATTTCAATCCAGTCCGTTAATAGACAGATGGTTTAAAAATAAGTGGTCTGCTTCTTGGCCAGGTTCTGATTTTTCTAAATCATTTCCAAATTCTGCCTATGTAGGAGTGCTCGGAGCAGCAAAAGGACGTATATTAATTGAATCATTCTATGGCAATGATGGAAAGGTTAAAGAAGATTCCAGGGCTAAAGTAGATACGGTATATGATAATGTGGGCGATGTAGGATATACTGGATGTCCTTATCGTTCTATTGAAGATACCAATGAATACTCGGATTCCACTGGATATGAATATAAACGATATCCAGTACAAAATGAAGCTATAAGCAAAATAGCTGATTATGGATTATCTCCTGGGGATTCAGTATTTTTAGTATGTGATATGTATGCATCTAAAAGCCTTCTTGATGCTGGTTCTACTACTAGAGCTAGCCTGCGATGGTTCAAGGGTACATCTTTATTATCTTCAAACGTATCATTAGAAATTCCAAAAAATGGAGCTGATAGATGGTTAAGATTTGAAAGATTTACTGCTGTTCCCACGGATGCTGATGGATTTACTATTGTGGTATCAAGATATCCAAAAACGTCTGTAGTTGGTGACTCTAAAATTAAAAATCTTGTATTTGTTCAAACTTCTCATGGCGAACAATTGAATAGCGTTATTCAGGAGTTTGGTGTGAATGGTATAAGAATGAATAAAGGTGTTGAAGGAGGAACCACAGTGATTATGGAACTTCCAAATTCAAAAGTCGATCCGAGCGGTGTTATTCCAGTTCAATCGTTCAGAGAAACATCAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9af412e68224645bcae6086e9ad4b75624fb4b9e0894659f268834873a5e9b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6749
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae bacteriophage vB_KpnM_KpV477 Komisarova,E.V., Krasilnikova,V.M., Kislichkina,A.A., Bogun,A.G. and Volozhantsev,N.V. 2017-09-14 — GenBank