Protein

View in Explore
Genbank accession
QCQ60297.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQQDVVLILANKMQADKLGLGGTFLLPDCTLSIDHKFENDVTEHPIDRGSSVSDHVVNKNVTFSVSGVYNTYSLQKYVQDGVSTQNRVADAYKKLLDLRNSKQQFTLVSRYDIYQNCVVKSLSIPVAPTDGNTLIFSMEITQVRVSQPFRQVTLVQLEDVSEQFVDAAQLKKEAGTKQRTKTSTTPIVNQADKVINGGSG
Physico‐chemical
properties
protein length:201 AA
molecular weight: 22216,84690 Da
isoelectric point:6,82411
aromaticity:0,06468
hydropathy:-0,30945

Domains

Domains [InterPro]
DC_0628
STR
8–200
DC_0628
IPR048494
ATT
29–150
IPR048494
QCQ60297.1
1 201
Architecture
STR
ATT
STR
STR 8-28 | ATT 29-150 | STR 151-200 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rheinheimera phage vB_RspM_Barba11S
[NCBI] 		2565646 Uroviricota > Caudoviricetes > Barbavirus >
Host Rheinheimera sp. BAL341
[NCBI] 		1708203 Pseudomonadota > Gammaproteobacteria > Chromatiales > Chromatiaceae > Rheinheimera >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCQ60297.1 [NCBI]
Genbank nucleotide accession
MK719718.1 [NCBI]
CDS location
range 61261 -> 61866
strand +
CDS
ATGAGTCAACAAGATGTAGTCCTGATTCTGGCTAATAAGATGCAGGCTGATAAGTTGGGGTTAGGGGGTACATTCCTCCTTCCCGACTGTACTCTGTCAATTGACCACAAGTTTGAGAATGATGTAACTGAGCATCCTATTGACCGTGGTTCAAGTGTATCAGACCATGTAGTCAATAAAAATGTCACCTTTAGCGTATCCGGTGTATATAACACCTACTCCTTACAAAAGTATGTACAGGACGGTGTTAGTACACAGAACCGTGTGGCAGATGCCTATAAGAAGTTGTTAGACTTGCGTAACAGTAAGCAGCAGTTTACATTAGTGAGCCGCTATGACATTTATCAAAACTGTGTTGTTAAGTCATTATCTATTCCTGTAGCACCTACTGATGGCAACACATTAATATTCTCTATGGAGATAACTCAAGTACGGGTGTCTCAACCTTTCAGGCAAGTCACTCTTGTTCAATTAGAAGATGTTAGTGAGCAGTTTGTAGATGCAGCACAACTTAAGAAAGAAGCTGGTACTAAACAAAGAACAAAGACTTCAACAACCCCTATAGTGAATCAAGCAGATAAAGTAATCAACGGTGGTAGTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
04ead270e57d07d19443f7032c24001e801f6f304e8a194e1af5865feb329ef9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7292
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and seasonal variations among aquatic phages infecting the Baltic Sea Gammaproteobacteria Rheinheimera sp. bal341 Nilsson,E., Li,K., Fridlund,J., Sulcius,S., Bunse,C., Karlsson,C.M.G., Lindh,M., Lundin,D., Pinhassi,J. and Holmfeldt,K. 2019-09-15 — GenBank