Protein

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Genbank accession
YP_009908773.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,53
Protein sequence
MEDFVRKTKGVRDITSLPLDTSHELDIVSDVKGKIYIKILNRYKELLFDNGTEQWVIDMLNNLEVDVEQLKEDILDVEQTLTELPMIEDNLETVETTLAQINTLFAQMQIDVQGIDLRTAELEREVIQLALKDQELLDKINNLDVEILYSNSNDFTGISSIDNPSLLDAPYYLSKVALGKNIADPTKTFPIKSSAYLIYAGDTEEELVIGQTYTITLKGTKPASQTFALYNYGIFRLGELKPVEGLTDVWSLTFTPEFLQPNFHRDLRIYQYPDSTAGTCQIDWLKIEKGDTRTPNIPYYKYVGINLEVSKNPNDYHWIPLAKSAELAESVDARLTKTISTYDTVNALQNNRLTSLESKVVDTTWQNVTVTEPFTSVTQPQVKKQNGIVYMRGTISNGTGDCFTLPEGFRPPAGAYEMQFRLPCRSANASDYATIYVRPSGLCSIAGVNGTKPIFLSGIIFSTT
Physico‐chemical
properties
protein length:464 AA
molecular weight: 52163,44040 Da
isoelectric point:4,66213
aromaticity:0,09052
hydropathy:-0,25733

Domains

Domains [InterPro]
DC_1681
STR
20–464
DC_1681
Coil
Unmapped
60–80
Coil
YP_009908773.1
1 464
Architecture
STR
STR 20-464
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009908773.1
1 464
Domain Start End Length (AA) Confidence
N-terminal 1 214 214 0,8630
Central domain 215 413 200 0,1367
C-terminal 414 464 50 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-214
Central
215-413
C-terminal
414-464

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage vB_EfaP_Zip
[NCBI] 		2501743 Uroviricota > Caudoviricetes > Rountreeviridae > Minhovirus > Minhovirus zip
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009908773.1 [NCBI]
Genbank nucleotide accession
NC_049930 [NCBI]
CDS location
range 5787 -> 7181
strand +
CDS
ATGGAAGATTTCGTCAGAAAAACAAAAGGGGTTAGAGATATCACGTCTCTACCTCTTGATACAAGTCATGAATTGGATATTGTTTCAGATGTAAAAGGTAAGATCTACATTAAGATTTTAAACCGTTACAAGGAATTGCTTTTTGATAACGGAACAGAACAATGGGTTATTGATATGTTAAATAACTTAGAGGTAGATGTAGAACAGTTAAAAGAAGATATTCTAGATGTGGAACAAACATTAACTGAACTTCCTATGATAGAAGATAACTTGGAGACCGTAGAAACAACGCTAGCTCAAATCAATACTTTATTTGCTCAAATGCAAATTGATGTACAAGGTATAGACCTTAGGACAGCAGAATTAGAAAGAGAAGTTATCCAATTAGCTTTGAAAGATCAAGAGTTATTAGATAAAATAAACAATTTAGATGTAGAAATTCTTTATTCTAATTCAAATGATTTTACAGGAATTTCTAGTATTGATAACCCGTCATTATTAGACGCTCCATATTATTTGAGTAAGGTGGCTTTGGGTAAGAATATTGCTGACCCTACAAAAACATTTCCAATTAAATCTAGCGCGTACTTAATATATGCAGGGGATACAGAAGAAGAACTTGTAATAGGTCAAACGTATACTATCACACTTAAAGGAACAAAACCAGCAAGTCAAACCTTTGCATTATATAACTATGGGATTTTTAGACTAGGTGAACTAAAACCGGTTGAGGGATTGACAGACGTGTGGTCACTAACGTTTACACCAGAGTTTCTTCAGCCAAACTTCCATAGAGATCTTCGTATTTATCAGTATCCAGATTCAACAGCAGGCACATGTCAAATTGACTGGCTCAAGATTGAAAAAGGTGACACACGAACACCAAATATACCTTACTACAAATATGTTGGCATTAATTTAGAAGTATCAAAAAATCCTAATGATTACCACTGGATACCATTGGCAAAATCAGCTGAATTAGCTGAATCAGTAGATGCTAGACTAACAAAAACTATTTCAACCTATGACACCGTTAACGCTCTACAAAACAATCGTTTAACGTCTTTAGAAAGCAAGGTGGTAGATACCACATGGCAGAATGTCACCGTTACAGAACCATTCACAAGTGTTACTCAGCCACAAGTGAAGAAACAAAACGGTATCGTTTATATGAGGGGAACAATTAGTAACGGAACAGGAGATTGCTTTACCTTACCTGAAGGTTTTAGACCACCAGCTGGAGCTTACGAAATGCAATTCAGGCTACCATGTCGCTCTGCTAATGCTTCAGACTACGCCACAATATACGTTAGACCAAGTGGATTATGTTCAATCGCTGGGGTAAACGGAACCAAGCCTATCTTTTTATCAGGTATCATCTTTAGTACAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f6d867f645574be6bf5384e3c49c261b1a12e5f4da15b50294e4b0583daab83
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7550
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Efficacy and safety assessment of two enterococci phages in an in vitro biofilm wound model Melo,L.D.R., Ferreira,R., Costa,A.R., Oliveira,H. and Azeredo,J. — — GenBank