Protein

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Genbank accession
YP_010001088.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPRVVDLHPRSRADKDPLQGLLDFTDLDKTIETSGNRIRDALNKVRDDFIEWLREVTGIDLSGALAFTDWLFEEIRSRVGVDLENLAALLEDLGDLDLASLLDAVRGDYDGDNSVLLGIQSSIGTLRSLAAGIVAPWRIPQLTLSQLTAQPSPNLLTGFGDFADGSTLDGDGVWTWDGDVGKTTPGSARTTADGTPRVLTSEAIAVSAGQQLECSGWVRWQGASGSGACMQLLVVPYVGAAAQTPVVISNIVVPPGTVGVSSQSDLAGSYVVAANVTAVRVRLTAEAAMTAGTVWWDDVVLRKTATSLPQQWISGLVDGLGDLWDGVENVATIITQIADIFAGAVVTPINAAVGQVKDWFLGLLGWQDDAASATDAIAESVVSVRTQVTYVRSVISVRSGRPLHETGPDRTACVSVPFHTLNLSPGGMSISGGRHEHKVLGNTGNATAGGDVHNHSGGTGVNSLEARDVSGSLDSAHSHTLTMNTPVVNATTNYAPWASIIIDAAAERKVLGWAAYKSGTVTGFYLDVFAQEPDGSVGPVIYSSPNLAGELLTSLTWMQHLMDGASVVADIDDVVDVQFRMTGAGIVHIAGPNFPYFTPITGMRPYSCGSGRNPSTTPVPASLSTTQRDAMYVGPVPFVSLGIDVGQTSIPVVIADDLNRGSFGAEYKVFGNIQIDGGRAKHTATGFVSNSGAAMRVESLNSDDFEIGFDFWPGGQIAGVGGRCTSSLSAAVWLVGDNDGIYIQTGAYNSRTTRQTLASAGAGRYTLRPRRSDDDTHDIYEVFYGNPDTTDPIGAWPDTGGIVTGGIGRRRVAMVAHGAAFFPSSELDNFVARDIAAVAA
Physico‐chemical
properties
protein length:840 AA
molecular weight: 88311,64940 Da
isoelectric point:4,64979
aromaticity:0,07262
hydropathy:0,02321

Domains

Domains [InterPro]
DC_2145
ATT
1–150
DC_2145 G3DSA:2.60.120.260
DC_0513
STR
255–840
DC_0513
YP_010001088.1
1 840
Architecture
ATT
STR
ATT 1-150 | STR 157-840
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010001088.1
1 840
Domain Start End Length (AA) Confidence
N-terminal 1 449 449 0,6549
Central domain 450 648 200 0,0928
C-terminal 649 840 191 0,9490
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-449
Central
450-648
C-terminal
649-840

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage DumpsterDude
[NCBI] 		2713262 Uroviricota > Caudoviricetes > Ruthyvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010001088.1 [NCBI]
Genbank nucleotide accession
NC_053172 [NCBI]
CDS location
range 19471 -> 21993
strand +
CDS
ATGCCTCGCGTCGTAGACCTACACCCGCGGAGCCGGGCGGACAAGGACCCGCTGCAGGGGTTGCTCGACTTCACCGATCTCGACAAGACGATCGAGACATCAGGCAACCGGATCCGCGACGCACTGAACAAGGTTCGCGACGACTTCATCGAATGGCTGCGTGAAGTAACAGGAATCGATCTGTCGGGGGCACTTGCGTTCACAGATTGGCTGTTCGAAGAGATTCGCAGCCGGGTGGGGGTAGACCTCGAAAACCTTGCAGCACTGCTCGAAGACCTAGGCGACCTCGATCTGGCTTCGCTGTTGGATGCGGTTCGTGGCGACTATGACGGTGACAACTCCGTGTTGCTGGGCATCCAGTCGTCGATAGGCACGCTGCGGTCGCTGGCCGCGGGGATCGTCGCGCCGTGGCGCATCCCGCAGCTGACGCTGTCGCAGTTAACCGCTCAGCCGTCGCCGAACCTGCTGACCGGGTTCGGCGACTTCGCTGACGGGTCGACTCTCGACGGCGACGGCGTGTGGACGTGGGACGGCGACGTCGGCAAGACGACACCCGGATCGGCGCGCACCACCGCCGACGGCACGCCGCGGGTCCTGACGTCCGAGGCGATCGCCGTCTCGGCGGGCCAGCAACTCGAGTGCTCGGGCTGGGTGCGCTGGCAAGGCGCGTCGGGTAGCGGCGCGTGCATGCAGCTCCTCGTCGTCCCCTACGTCGGGGCGGCCGCGCAGACGCCGGTCGTGATCTCGAACATCGTCGTCCCGCCTGGCACGGTCGGAGTGTCGAGCCAGAGCGATCTCGCCGGCTCCTACGTCGTGGCCGCCAACGTCACCGCGGTTCGGGTGCGCCTCACCGCCGAGGCGGCAATGACCGCCGGGACTGTGTGGTGGGACGACGTCGTGCTGCGCAAGACCGCGACGAGCCTGCCCCAGCAATGGATCTCGGGTCTGGTCGACGGCCTCGGCGATCTGTGGGACGGCGTCGAGAATGTCGCGACGATCATCACCCAGATCGCAGACATCTTCGCCGGTGCTGTCGTGACACCGATCAACGCGGCCGTGGGGCAGGTGAAGGACTGGTTCCTCGGACTGCTCGGCTGGCAGGACGACGCGGCGTCGGCGACGGATGCGATCGCCGAATCGGTTGTCTCGGTGAGGACTCAGGTCACCTACGTGCGATCGGTGATCTCGGTGCGCAGCGGTCGACCTCTACACGAGACAGGCCCGGATCGCACGGCGTGCGTGTCGGTGCCATTCCACACGCTCAACCTGAGCCCGGGCGGCATGTCGATCAGCGGCGGCCGCCACGAGCACAAGGTTCTCGGCAACACAGGGAACGCGACCGCCGGAGGTGACGTACACAACCACAGCGGGGGCACTGGGGTCAATAGCCTTGAGGCGCGCGATGTCTCGGGCAGCCTGGACTCTGCCCACTCCCACACCCTCACGATGAACACGCCGGTCGTCAACGCGACCACGAACTACGCCCCGTGGGCATCGATCATCATCGACGCGGCGGCTGAGCGGAAGGTGCTGGGCTGGGCTGCGTACAAATCGGGCACCGTCACCGGCTTCTACCTCGACGTCTTCGCGCAAGAACCTGACGGTTCGGTCGGCCCGGTCATCTACTCGTCGCCGAACCTGGCGGGCGAGCTACTGACATCGCTGACGTGGATGCAGCACCTCATGGATGGGGCGTCGGTCGTCGCCGACATCGACGACGTCGTCGATGTCCAGTTCCGCATGACGGGCGCGGGGATCGTCCACATCGCGGGCCCCAACTTCCCGTACTTCACGCCCATCACCGGGATGCGCCCGTACTCGTGCGGTTCCGGTCGCAACCCCTCGACCACCCCCGTGCCTGCGAGCCTGTCGACCACGCAGCGCGATGCGATGTACGTCGGCCCCGTGCCGTTCGTCAGCCTCGGGATCGACGTCGGACAGACGAGCATCCCCGTCGTCATCGCCGACGATCTCAACCGTGGGAGCTTCGGCGCCGAGTACAAGGTCTTCGGGAACATCCAGATCGACGGCGGTCGGGCCAAGCACACCGCAACCGGCTTCGTCAGCAACAGCGGCGCGGCGATGCGCGTCGAGTCCCTCAATTCCGACGACTTCGAGATCGGGTTCGACTTCTGGCCAGGCGGCCAGATCGCAGGAGTCGGCGGTCGCTGCACCTCCAGCCTCAGCGCGGCCGTATGGCTGGTAGGCGACAACGATGGCATCTACATCCAGACGGGCGCCTACAACAGCCGCACCACCCGCCAGACCCTGGCGTCCGCCGGAGCTGGCCGGTACACCCTGCGGCCCAGACGATCCGACGATGACACCCACGACATCTACGAGGTGTTCTACGGAAACCCCGACACCACAGATCCGATCGGCGCGTGGCCCGACACAGGCGGGATCGTGACCGGCGGGATCGGCCGCCGACGCGTCGCGATGGTCGCCCACGGTGCCGCGTTCTTCCCCTCGAGCGAGCTCGACAACTTCGTCGCCCGCGACATCGCAGCGGTGGCGGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c718264bb6ec0338fabbe5f3869f21d4fd5b5cd79349d41b6a26bb975eb9f55
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3237
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50