Protein

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Genbank accession
YP_009598836.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MTFPVNGKALASQGYVDGKVAAIPAGPQGPAGPAGPQGVQGATGATGSQGIQGPAGPSTYDFHNFINGKPLVQEILMRAISVRTVKILAGCPGSFAFCSIAASASFDIAIMKNGVQVGTLNFAANATNGTFTLATDLLLNPGDQFAMKCLPSTQDATLTDLTIAILANTA
Physico‐chemical
properties
protein length:170 AA
molecular weight: 17084,32500 Da
isoelectric point:6,51536
aromaticity:0,06471
hydropathy:0,26941

Domains

Domains [InterPro]
DC_1049
RBD
34–169
DC_1049
YP_009598836.1
1 170
Architecture
RBD
RBD 34-169 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RP12
[NCBI] 		1923889 Uroviricota > Caudoviricetes > Chimalliviridae > Ripduovirus RP12 >
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009598836.1 [NCBI]
Genbank nucleotide accession
NC_041911 [NCBI]
CDS location
range 141488 -> 142000
strand -
CDS
ATGACTTTTCCTGTTAATGGCAAAGCGCTCGCATCGCAAGGCTATGTCGATGGCAAGGTAGCCGCTATTCCTGCGGGACCCCAAGGGCCTGCCGGGCCTGCGGGCCCGCAAGGTGTGCAGGGTGCTACCGGAGCGACGGGCTCCCAGGGTATTCAAGGACCTGCTGGTCCGTCTACCTATGACTTTCACAACTTCATCAACGGCAAGCCGCTCGTACAGGAAATCTTGATGCGTGCGATTTCTGTTCGCACAGTCAAGATTCTGGCTGGCTGTCCGGGTAGCTTTGCTTTCTGTAGTATTGCAGCCTCTGCTTCGTTCGACATTGCGATTATGAAGAACGGTGTACAGGTTGGTACGCTGAACTTTGCTGCGAATGCGACCAACGGCACGTTTACTCTGGCAACTGACCTGTTACTCAACCCGGGCGACCAATTTGCCATGAAGTGCCTGCCATCTACGCAAGATGCCACGCTTACCGATCTGACGATCGCTATCCTGGCCAATACTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0731c32196f858e9a5c185a64dcc977c2958f5e812d0fe1ba96808d9102c2701
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8584
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of two jumbo phages RP12 and RP31 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Yoshikawa,G., Ogata,H. and Yamada,T. 2020 — GenBank