Protein

View in Explore
Genbank accession
XUQ13347.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MALPNGSQVFIEQTRSITEVEATSITNSKEPVATVADIGDLVNGDYVLVLESVWAGLKNRVLRVKSIDALKVTLEGDGSTDTSNINKFPAGGASTLVKITSWIEIPCISDIAKTGGEQQFYTKQCLADEREKQTPTFKSATSIGYTFDFDYANPITQLLIGYDEDGKTRAMRMFVPKASYPIRTFSGVPSFDDVPNTVMNEDETTVLNISLDGKYTHMKEYVAPTP
Physico‐chemical
properties
protein length:226 AA
molecular weight: 24767,64100 Da
isoelectric point:4,69828
aromaticity:0,08407
hydropathy:-0,23938

Domains

Domains [InterPro]
DC_0037
ATT
1–51
DC_0037 IPR014918
XUQ13347.1
1 226
Architecture
ATT
TAS
ATT 1-51 | TAS 52-218 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUQ13347.1
1 226
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,9732
Central domain 18 215 199 0,0400
C-terminal 216 226 10 0,7802
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-215
C-terminal
216-226

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LF82-10
[NCBI] 		3433663 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli LF82
[NCBI] 		591946 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUQ13347.1 [NCBI]
Genbank nucleotide accession
PV660453 [NCBI]
CDS location
range 9084 -> 9764
strand +
CDS
ATGGCACTTCCTAACGGTTCACAGGTCTTCATTGAGCAGACACGATCCATAACCGAAGTTGAAGCAACGAGCATCACCAACTCGAAAGAGCCAGTTGCGACGGTTGCCGATATTGGCGATCTGGTAAATGGTGATTACGTGCTGGTTCTCGAATCAGTATGGGCAGGTCTGAAAAACCGCGTCCTTCGCGTCAAGTCTATTGATGCGCTGAAGGTAACTCTTGAGGGTGACGGCAGCACGGACACGAGCAACATCAACAAGTTCCCGGCTGGCGGCGCATCAACGCTGGTGAAGATCACAAGCTGGATTGAAATCCCATGTATCAGCGACATCGCCAAAACTGGTGGCGAACAGCAGTTTTACACCAAGCAGTGTTTAGCTGATGAGCGAGAGAAGCAAACGCCAACCTTCAAGTCTGCAACGTCGATCGGCTACACGTTCGATTTCGACTACGCAAACCCGATTACTCAACTCCTGATCGGTTACGACGAAGACGGCAAAACCCGCGCGATGCGTATGTTCGTTCCAAAGGCGAGCTACCCGATCCGCACCTTCTCTGGCGTGCCATCGTTCGACGATGTGCCAAACACGGTGATGAACGAAGACGAAACAACCGTCCTCAACATTTCCCTTGATGGCAAGTATACGCACATGAAGGAATATGTTGCACCGACACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5bd52a7671e5e944233ac6715f773d566a0924516470400ad384c11cfeb4648f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8003
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Novel Phages Infecting Escherichia coli LF82 Steczynska,J.P. and Williams,K.P. 2025-10-09 — GenBank