Protein

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Genbank accession
GENB_6a10226d65f1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYVLVRSRYRPSRRGGRWQEADFTNELVTTLAAKYGDIYLYIQYPGQGEPVTRALHWVNVTNWLNDVEPTVTVQEWLTSLGNKALPFDAELPNEKIRLVKYAQAWHCGYNFTPVARGGHPLDQGSDFHKEDLLMTHPKHQPSKIRDYSMISVNGYFHLCDYTSAGVRIIDGNTTLRKCNDNQIGVYSFETIGKLTFVPIVDSMISGLNPTAPLWDGTYLTMPENVDIENKTVLLVTGGYLNVLSSVYNRVGERTWRVQFGNMMFLDRYLESYHAMDLSSLGLTFDKENPTLFNVDELKNNDVIRKYLTLSQSFFVIVDSQSFFQEYEAVEYLNLPGRYFDNKYDRSPLVGAYGRMLDYHTIKEPHHEGIIPQHENMYVYCAVLNRRNSYDANTRAWPEQEIVDGGRYPAHPFRDETAYYRILGVEG
Physico‐chemical
properties
protein length:426 AA
molecular weight: 49168,82490 Da
isoelectric point:5,73462
aromaticity:0,12911
hydropathy:-0,43638

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_6a10226d65f1
1 426
Domain Start End Length (AA) Confidence
N-terminal 1 26 26 0,7911
Central domain 27 231 206 0,5249
C-terminal 232 426 194 0,6315
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-26
Central
27-231
C-terminal
232-426

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_phiLBG22
[NCBI] 		2853976 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OU343167.1_CDS_[complement(132134..133414)] [NCBI]
Genbank nucleotide accession
OU343167.1 [NCBI]
CDS location
range 132134 -> 133414
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
9752f2b5fc5f238555967d44ae80f1c76db1d7149cc7d851d858bbae03a8736f

                    

                    
                      ColabFold
                    
                  

                  

                  

                    

                      Source
                      ColabFold
                    

                    

                      Method
                      ColabFold
                    

                    

                      Resolution
                      0,8969
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
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Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50