Protein

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Genbank accession
UCR75298.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MANLKPYFSNNKQFVITHMIHPTTTTIRVHSGQGLTIPSDYTHIVGTLVPMSGVGDLEIVHIIKIEDNEFIIERAQENTAALSFLPGAVLEVRLTAESLNTFSLSLKALTSPLNLLIPRDFPNLQEAVDYASQYIAIRNVGVLIEFEEGYFPDSGVTLKGRNCSLITISSKSSGKLITLSSSFVGRFIHCEDGVAPVLDAYVKATGSGLERVYSLINSQGSLTPGSGGEGAYGRPLYVNTGHVSAGQTVWRRFGDSIYFSAGSSGQLGSSLVEEVSFLANGALTVSRGSSVEAQNIVFKQCSYPIEVKRAGSSLNAHGAVIEDCSRRIARITRRGALALTGATITGVGDTGIEVYGGELDIGEGASITGGSLLGYGIHANGASSVNATNVTIEGFSTGILAEGASLVDAAGGEIKNNASLGIHAQRGAVINMNVGNVTNNPQDARVTQGGIIALTGATTSNSVSPGTPNVIDTNLNGFGGLNSVSSNRGIIWG
Physico‐chemical
properties
protein length:493 AA
molecular weight: 51382,12190 Da
isoelectric point:5,71945
aromaticity:0,06288
hydropathy:0,08722

Domains

Domains [InterPro]
DC_1478
STR
2–493
DC_1478
IPR011050
STR
119–440
IPR011050
IPR012332
STR
151–491
IPR012332
IPR039448
ENZ
314–458
IPR039448
UCR75298.1
1 493
Architecture
STR
STR 2-493
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UCR75298.1
1 493
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,9262
Central domain 157 471 316 0,9557
C-terminal 472 493 21 0,7708
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-471
C-terminal
472-493

Taxonomy

  Name Taxonomy ID Lineage
Phage Alcaligenes phage vB_Af_QDWS535
[NCBI] 		2877942 No lineage information
Host Alcaligenes faecalis
[NCBI] 		511 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCR75298.1 [NCBI]
Genbank nucleotide accession
OK172329.1 [NCBI]
CDS location
range 7900 -> 9381
strand +
CDS
ATGGCTAACTTAAAACCATATTTCTCGAATAACAAGCAATTTGTGATCACTCATATGATCCACCCTACGACCACTACCATTCGTGTACATTCTGGACAGGGGTTAACAATTCCATCTGATTATACACACATCGTCGGAACTTTAGTTCCTATGAGTGGTGTGGGTGACTTGGAGATTGTCCATATCATAAAGATTGAAGACAATGAATTTATAATTGAGCGGGCACAAGAAAACACGGCGGCACTTTCTTTCCTTCCGGGGGCGGTGCTAGAGGTTCGATTAACTGCGGAGAGTCTAAATACATTCTCTTTATCTTTAAAGGCTTTAACATCTCCTTTGAATCTCCTGATCCCTCGTGATTTCCCTAATCTACAAGAGGCTGTTGATTACGCTTCTCAGTATATAGCTATTCGTAATGTCGGAGTGTTAATTGAGTTTGAAGAGGGTTATTTTCCAGACAGTGGTGTAACTCTTAAAGGGCGAAATTGTTCCCTAATCACAATCTCCTCAAAGAGTAGTGGTAAACTAATTACCCTATCCTCCTCTTTCGTAGGACGTTTTATTCATTGTGAGGATGGGGTAGCTCCTGTTCTGGATGCTTATGTAAAAGCCACAGGCTCCGGTTTGGAGCGGGTGTATTCTTTGATAAATTCACAAGGAAGTTTAACTCCGGGTAGCGGAGGAGAAGGAGCATATGGGCGTCCTTTATACGTTAATACAGGGCATGTCAGTGCTGGGCAGACTGTCTGGCGACGCTTTGGAGATAGTATATATTTCTCGGCAGGTAGTTCAGGCCAACTAGGAAGTAGTCTTGTAGAGGAGGTCTCTTTTTTAGCTAATGGGGCCTTAACTGTCTCCCGAGGAAGTTCTGTAGAAGCACAGAACATTGTGTTTAAACAATGTAGCTATCCTATAGAGGTAAAGCGGGCAGGCAGTTCTCTTAATGCTCACGGTGCGGTTATTGAAGACTGTTCTCGCCGTATCGCCCGAATTACCCGACGAGGGGCACTCGCATTAACGGGAGCTACCATAACTGGTGTGGGGGACACAGGAATTGAGGTATATGGGGGGGAGTTAGACATAGGAGAAGGAGCATCTATCACAGGTGGAAGTCTTTTGGGGTATGGCATTCATGCCAATGGGGCATCCTCTGTAAATGCTACAAACGTCACCATTGAGGGGTTTTCCACTGGAATTCTAGCAGAAGGGGCTTCTTTAGTTGACGCTGCTGGGGGGGAAATTAAAAATAACGCCTCTCTAGGAATCCACGCCCAGCGAGGGGCTGTTATTAATATGAATGTAGGAAATGTAACCAACAATCCCCAAGATGCCCGAGTGACTCAAGGAGGCATTATAGCCCTAACAGGAGCAACTACTTCTAATAGTGTGTCCCCGGGGACTCCTAATGTGATTGACACAAATTTAAATGGTTTTGGGGGGTTAAATTCTGTAAGTTCAAACCGAGGAATAATCTGGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eb2335adf702a2afd7c208597cf6081d5ad429f91bb0a30f1d88d61cbb269d2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8786
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of a novel Alcaligenes phage vB_Af_QDWS535 Jing,Y. and Wang,J. 2021-10-18 — GenBank