Protein

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Genbank accession
YP_010674198.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALYPIKSLGAVGVIADQAPTDLAPNAFTNAINARFVEQRVFKTGGNAPLSYVDEDKDLTPLSFISMPFDYYSAGNSFLIVGTDKKLYKLTDESLTDISRKVATVTKKASATIKIYPVVSRITPKESTISMNFNQTKSLEVTISPEDANNPELVWSVSNSSYGQITVDPTDSKKASLTSLNKEGNLVVTVQTKDESVSAQIAVNIIDGDSGIFLSQDTVTVRKGGNTTITAVTGKTPVSWSTTNGSIVSVTPNANTLTAVLVANGEGTATITADNGTKTASCVVNVIPQIDSITLSQTDVTINRGTQYILTATVSPTNAPNKNITWTSSNPNIATISGTGTEATITAITAGFTEITATTQEGSRTAVCTVRVDLSGRMMRTSLMAMSSTEPDAPEVVEDVVVPESEEVLYFASPSSGIDTTGMSEGNSFYDYSNVDDMEGFARASLFATPLDSVTLDVVSASLDVGEEIVITATASPEGDYSYLWSVDKTGYVSTTSVTGKSIKLTALRKGEINITCSVSQMTQRDYDAFDDYPWYHAVISNCVVATTHYETPQVKEFESEYFTDLPGWGEQTVVDNDGNPSVKKFNWKCERVRSFNNRLFALNMRESNASGVTTNYPLRLRWSNFANENKAPTLWDDFAYDRLVTSDLASNIVGQTEALENGYAGYIDLADSNGSLIDILPLKDYLFVYTEFETYIGSPTNNTYQPLMFKKLFNDSGILAPECVVEVEGSHFVVTQNDVILHNGATKKSIASNRVKNMLINEICLVNPLATRVHLHQDKKEVWILYVGPGEPKESYACTKAAVWNYEFDTWSFRTIPYAQCIGLVDPPVLERGPIWADFQEISWDDPSIKELVWRKDATNFRQRITIVGSFLRGFYQVDIGALDYFYDRLNDTVIEKPLEMRLERTGIDFDNVTNEWNQKHVNRFRPQTTGSGTYVFEAGGSQFSNEYGHPHTSKTYTIGVDRHVSVRLNHPYLFYNVIDNDVNSNAAINGLTIEFAVGGRR
Physico‐chemical
properties
protein length:1003 AA
molecular weight: 110260,88490 Da
isoelectric point:4,77939
aromaticity:0,09372
hydropathy:-0,23579

Domains

Domains [InterPro]
DC_0191
STR
14–1003
DC_0191
G3DSA:2.60.40.1080
STR
115–205
G3DSA:2.60.40.1080 G3DSA:2.60.40.1080 IPR007110 G3DSA:2.60.40.1080
IPR003343
STR
118–202
IPR003343 IPR003343 G3DSA:2.60.40.1080 IPR003343
IPR003343
STR
289–369
IPR003343
IPR008964
RBD
290–372
IPR008964
IPR003343
STR
291–370
IPR003343
YP_010674198.1
1 1003
Architecture
STR
STR 14-1003
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010674198.1
1 1003
Domain Start End Length (AA) Confidence
N-terminal 1 832 832 0,8118
Central domain 833 992 161 0,3245
C-terminal 993 1003 10 0,9909
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-832
Central
833-992
C-terminal
993-1003

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_WFI101126
[NCBI] 		2508203 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010674198.1 [NCBI]
Genbank nucleotide accession
NC_070991 [NCBI]
CDS location
range 14804 -> 17815
strand +
CDS
ATGGCGTTGTATCCAATAAAATCACTCGGTGCTGTCGGTGTTATTGCTGACCAAGCACCTACTGATTTAGCTCCTAATGCTTTCACTAACGCTATAAACGCTCGGTTTGTTGAGCAGAGAGTTTTTAAGACGGGGGGCAACGCCCCTCTTTCTTACGTAGATGAAGATAAAGACTTAACCCCTCTGTCTTTCATATCTATGCCTTTCGATTACTATAGTGCAGGTAATAGCTTTCTTATTGTAGGCACTGACAAGAAGCTATATAAACTGACAGATGAAAGCTTGACTGATATCAGCAGAAAAGTCGCTACGGTGACTAAAAAAGCCTCTGCTACTATCAAAATATATCCTGTGGTCTCTAGGATTACTCCTAAAGAGTCTACTATTTCCATGAACTTCAATCAAACTAAATCTTTAGAAGTTACAATCTCTCCGGAAGATGCTAATAACCCTGAACTTGTTTGGAGTGTTAGTAACTCTTCTTACGGTCAGATTACTGTAGACCCTACTGACTCCAAGAAAGCCTCTTTAACCTCTTTGAATAAAGAAGGCAATCTCGTAGTTACAGTTCAGACTAAAGACGAGTCTGTATCAGCTCAAATTGCTGTCAACATCATCGATGGAGATTCAGGTATCTTCTTGAGTCAAGATACTGTAACAGTTCGTAAAGGTGGTAATACCACAATAACTGCGGTGACTGGTAAAACTCCTGTAAGTTGGTCCACTACTAACGGTTCTATCGTTTCTGTGACTCCTAATGCTAACACACTCACGGCAGTGCTTGTTGCTAATGGAGAAGGAACAGCAACTATCACAGCGGATAACGGAACTAAAACTGCATCATGCGTTGTTAATGTAATACCACAGATTGACAGTATCACTCTGAGTCAAACAGATGTTACCATTAACAGAGGGACTCAATATATTCTTACAGCTACAGTATCTCCAACGAATGCTCCTAATAAAAACATAACATGGACTTCCTCTAACCCGAATATTGCTACAATATCTGGTACAGGTACAGAGGCAACCATTACTGCGATTACAGCTGGCTTCACTGAGATTACCGCTACTACTCAAGAAGGCAGCAGAACCGCTGTCTGTACAGTTCGTGTAGATTTGTCTGGAAGGATGATGAGAACCTCTCTTATGGCTATGTCTTCTACTGAACCAGATGCTCCAGAAGTGGTTGAGGATGTAGTAGTTCCTGAGTCAGAAGAGGTTTTGTATTTTGCATCACCTTCCTCTGGGATAGATACTACTGGAATGTCTGAAGGGAATAGCTTCTATGATTATTCAAACGTGGATGACATGGAGGGTTTTGCAAGAGCTTCTCTTTTTGCCACCCCTTTAGATTCTGTAACGTTAGATGTAGTTAGTGCTTCTTTGGATGTAGGAGAGGAGATTGTTATTACAGCTACAGCTTCTCCAGAGGGTGATTATTCTTACTTGTGGTCTGTTGATAAGACTGGGTATGTATCGACTACTTCTGTAACTGGCAAGTCTATCAAACTTACAGCTCTTCGTAAAGGTGAGATTAACATAACATGTTCTGTCAGTCAAATGACACAGAGGGATTATGATGCGTTTGATGATTACCCTTGGTATCATGCTGTTATATCAAACTGTGTTGTTGCTACTACTCACTATGAAACCCCTCAAGTAAAAGAGTTCGAATCTGAATATTTTACCGATCTTCCGGGATGGGGAGAACAAACAGTAGTGGATAACGATGGGAACCCCTCGGTTAAGAAGTTCAACTGGAAGTGTGAAAGGGTTCGCTCTTTTAATAACAGACTCTTTGCTCTGAATATGAGGGAGTCAAACGCTTCTGGTGTTACAACTAACTACCCGCTCCGTCTTCGTTGGTCTAATTTTGCTAATGAGAACAAAGCTCCTACACTGTGGGATGACTTTGCCTATGATCGTTTAGTAACATCTGACTTAGCTTCGAATATAGTGGGACAGACTGAGGCTCTGGAAAATGGTTATGCTGGTTACATTGATTTAGCAGACTCTAACGGGAGTTTAATTGATATCCTACCTCTTAAAGATTACTTGTTCGTTTACACAGAGTTTGAAACGTACATTGGTTCTCCAACTAATAACACGTATCAACCACTGATGTTCAAGAAACTCTTTAATGACTCTGGTATCCTTGCCCCTGAGTGTGTAGTAGAAGTTGAAGGCAGTCACTTCGTTGTTACTCAGAACGACGTGATTCTACACAACGGTGCAACTAAGAAGTCAATTGCTTCCAACCGTGTCAAGAATATGTTGATTAATGAGATATGTCTGGTCAACCCGTTAGCTACCAGAGTTCACTTACATCAAGATAAAAAAGAGGTTTGGATTCTTTATGTAGGTCCGGGAGAGCCTAAGGAAAGCTATGCTTGTACTAAAGCTGCTGTATGGAATTACGAGTTTGATACTTGGTCTTTCCGTACAATACCTTACGCTCAGTGTATTGGTTTGGTTGATCCCCCTGTTCTTGAGAGAGGTCCAATCTGGGCTGATTTCCAAGAAATCTCTTGGGATGATCCGTCAATAAAAGAGCTAGTCTGGAGGAAAGATGCAACAAACTTCCGTCAGAGGATAACCATAGTAGGTTCTTTCTTACGTGGATTCTATCAAGTGGATATTGGTGCTTTAGATTATTTCTATGATAGACTCAATGATACTGTTATAGAAAAACCCTTGGAGATGAGGTTAGAGAGAACAGGCATTGATTTTGATAATGTCACTAATGAATGGAATCAGAAGCATGTCAACAGATTCAGACCTCAAACAACAGGTTCTGGAACTTATGTATTCGAAGCAGGAGGCAGTCAATTCTCAAACGAATATGGTCATCCACACACATCTAAAACATACACAATCGGTGTTGATAGGCATGTCTCTGTGAGACTGAACCATCCATACCTTTTCTATAATGTTATAGATAATGATGTTAACAGTAATGCTGCTATCAATGGTTTAACGATAGAGTTTGCTGTTGGCGGGCGGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f5380f6e41b7b458df88f28032ef176668d021ba6f88bdf7daec407705e36eb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2945
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank