Protein

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Genbank accession
QDB71225.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSDNDLQLRITELPKLDHFDSNSVLPAVGRSQGAKMTGKVNFREMRSYFDLSNAYETIKDGVDATKLGDTFFVYSDGTKVFANEYQNIGGAATPIQDPKEGVIYYPTRMGIVGSLAAGATVGSFDELRNTRPLKEGVSIYLSSYYKGLNKGGGEFIGYYGKRADDGGMVAGDGNNYYWVRNANFVTPEMFGAYGAPEKDDSAAIEGALNSGLDVQFDGSATYIVNRTLVLKSIKWQQFIDGNGAWIKYSDKSRGFINEIDANGVTQRYTKFRSFFNLNLQGPATKNSKWNDVNQCDALCISYGVVENCNFYGWSNALRGFGEAYVNNCFGDDLRTAMFSCYDPGYNEIINSSVGWCSGDAIILKGGSGKAHNVDIVYAGCIDKNNEDGATALPGCIVSCGADGAGSQNIQISNISCQYFGCAGLNIQGDGVTVSGDMNLGSIYEDNFQYANQAAALWIGAKNFTIGNLHFNKVHVGVGINGNCANGSIGKIRIMSKTNLAGSTLFSATDGPNSQITKVIVDAIDFLGASTINNDVYINTDGLYLKSFYIQSLNNLQGGYTVSLRKNARIGKMILAATTSASTSPVMLIESDSVIDELEFRRNFGTALVVENNARPAIKRLSFQYKQGIAAPFIIKGDGTMTLNWGDVDMFGPSVARPQIAGKLVMNSYQGPTFRPFDAAVYAGVSVPNRVFQGIEEMRMVGPSKEGDTAYLSGYYLNSTSTLGSGTFIGHIGAAPVADDKGCLIVGNGYWWERIVAGPLDVFMFGAKGDFNVTTQSGTDDSDSFISTIAAAIRLNYRDVLVPAGYNYYLTKTINPGGVGYRGNKGVAIRGGSTANTNIFFNPATNGTACFEILGGSGIHSGREVSGFTIQPVNSKLYTGVGIRYAGCCFVRPANFNIIMKFDIALHLLNDQGPGVFTEYNNFFNWRLHRSHVDVLFEVNGGDNSFHGNSFYESQIQVKTNQNLGDGNTDVGIGIELRGVTAPAYWYDAKVFVDIFGGPGAIGMKLTRANTDHLIGGINGEGDLIFQSTDTSAFELAGDLRSIGKVTWDVAAEPTTGRAAVYIFNNRISNESNFTSPRMNGLSPRLLNPSLADRTDNGSVPAIFRATKLDYDSICNAVIGLANNRHLWGYIPPNGNLQSFVPGAALSFDGTSFTSYSDSFIIGTQNRTFSINGTALFPSTTGSLTLGQSQYRWSSIYLNNFDIDSNGINPVVTNAMSIGSTSKIFKDIYLQNAPTVVSDEKDKDEVSEIPPEVIAAWGKINFSQWKMKTAIDEKGEKARLHVGVIAQDIQKAFQEANLDATDYGILIIEKDEDENEQWMVRMDECLVLEAAYQRSRLDEIEKLLKGKK
Physico‐chemical
properties
protein length:1347 AA
molecular weight: 146074,99480 Da
isoelectric point:5,21477
aromaticity:0,10765
hydropathy:-0,19094

Domains

Domains [InterPro]
DC_1164
ATT
4–122
DC_1164 DC_1420 IPR036388
DC_0717
ATT
103–221
DC_0717 DC_0717 IPR030392
cd10144
CHP
1237–1335
cd10144
IPR030392
CHP
1237–1346
IPR030392
QDB71225.1
1 1347
Architecture
ATT
RBD
ATT
RBD
CHP
ATT 4-221 | RBD 605-676 | ATT 677-796 | RBD 1224-1318 | CHP 1319-1346 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDB71225.1
1 1347
Domain Start End Length (AA) Confidence
N-terminal 1 200 200 0,9914
Central domain 201 728 529 0,8985
C-terminal 729 1347 618 0,3916
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-200
Central
201-728
C-terminal
729-1347

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Moabite
[NCBI] 		2587814 Uroviricota > Caudoviricetes > Chimalliviridae > Moabitevirus moabite >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
a082018193e53b8734a22b7e95d022ec6eb084cba63777478d5ae20a54767e91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50