Protein

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Genbank accession
APD22500.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MGIDQYLKVIKEGVFGRDVRQAIHDGIERVYEDATFDGNTNMEVAKARGTFDHLSDRFSTIDNIINSKADEAEIKAMLNNILDGSPKGTYSSISALRTAKPSGDKGIYVTTDNGHWNYWDGSSWADGGSYQSPTDGVPNQFGVIFDGLLTIDRKTKTVSLKKDTWISFGNKNYAPNANLSISYEPTGLSEYVVYDFQNKGLTVMTLANVKNITSTQVILAIMYKGTLHYPVNSMFVKTIGYSEYTQDSLIGSVVQGKIIYDNYSKTFNFIGFGEQNEIIVSKGTSYYSIKEHENLQLSSGFLHHLILDTMENKFKLVKSSAMSSGATFTSKNTDILIASIYLGELTHYSSNNFIETTKSLLNNAWQLEELIVDLQTKKTVIVTLGDSTTDGWRTSNYTSNNDNINNLKEGNNTYSGILNNIINQQRGYNFDHKIYNRGFSGKTINWLRQNLDAVLSPIPESIDYAFIAMGINDMVYDVSKIKSFRDDHINVINRLFAKGIKPVLMSTQAEFENYKRFGSKINAIADNIKKDLAEELGLPFIDYNAGTSNILNHSEYKLKDLIPDMCHFGDLGHQKGAEFLASQLISQTVFVSGVSKIGYQNNKVASDLNYSDFLTDEQKDVKWTTRTDGFDLEGQLNSTQTKTMFEVSVYIERPSIVHYFGDNVIVTSNGRSLSDGTVLDVGFYRISAKNIPGVASKFRGLKFNMKEV
Physico‐chemical
properties
protein length:708 AA
molecular weight: 79195,97080 Da
isoelectric point:5,84387
aromaticity:0,10734
hydropathy:-0,35198

Domains

Domains [InterPro]
DC_1932
STR
1–645
DC_1932
IPR051532
Unmapped
355–584
IPR051532
IPR036514
STR
357–585
IPR036514
SSF52266
STR
381–586
SSF52266
cd00229
ENZ
381–583
cd00229
IPR013830
ENZ
384–574
IPR013830
APD22500.1
1 708
Architecture
STR
STR 1-645 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APD22500.1
1 708
Domain Start End Length (AA) Confidence
N-terminal 1 507 507 0,6435
Central domain 508 697 191 0,1918
C-terminal 698 708 10 0,8958
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-507
Central
508-697
C-terminal
698-708

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IPP25
[NCBI] 		1916165 No lineage information
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD22500.1 [NCBI]
Genbank nucleotide accession
KY065466.1 [NCBI]
CDS location
range 30159 -> 32285
strand +
CDS
ATGGGAATTGACCAATATTTAAAAGTTATCAAGGAAGGAGTTTTTGGTCGCGATGTTCGACAAGCTATTCATGACGGTATAGAACGAGTCTATGAAGATGCAACATTTGATGGCAACACAAATATGGAAGTGGCTAAGGCCAGAGGCACCTTTGACCATCTATCTGATAGATTCTCTACGATTGATAATATTATCAATTCAAAAGCAGACGAAGCTGAAATAAAAGCTATGCTTAATAATATTTTAGACGGGTCGCCTAAAGGGACATATTCGAGTATTTCAGCTTTGCGTACAGCAAAGCCATCTGGTGATAAAGGTATTTATGTTACAACTGATAACGGCCACTGGAATTACTGGGACGGAAGTTCATGGGCGGATGGTGGTTCATATCAATCGCCAACTGACGGCGTTCCTAATCAGTTCGGCGTAATTTTCGACGGATTATTAACTATTGATCGTAAGACTAAAACAGTATCCTTAAAAAAAGATACATGGATTTCGTTTGGAAATAAAAATTATGCTCCAAATGCTAATTTGAGCATTAGTTACGAACCAACTGGATTGTCAGAATATGTTGTTTACGACTTCCAAAATAAAGGGTTAACCGTGATGACTTTGGCGAACGTTAAGAACATCACGTCAACGCAAGTCATACTTGCTATTATGTATAAGGGTACTTTACATTATCCAGTTAATTCTATGTTCGTTAAGACAATTGGCTACTCGGAATATACGCAGGATAGCTTAATTGGTTCGGTTGTACAAGGCAAAATAATCTATGACAATTATTCAAAAACGTTTAATTTTATCGGATTTGGAGAACAGAACGAGATTATTGTTTCAAAGGGTACAAGTTACTACTCGATAAAAGAGCATGAAAATCTTCAACTTAGTAGTGGATTCTTACATCATCTTATTTTAGATACTATGGAAAATAAGTTTAAGCTAGTGAAGAGTTCAGCGATGTCTAGTGGAGCAACTTTTACAAGTAAGAATACAGATATTTTGATTGCATCAATATATCTTGGAGAGCTCACGCATTATTCTAGTAATAATTTTATTGAGACTACAAAATCGTTATTAAATAATGCATGGCAATTAGAAGAATTGATTGTCGACCTTCAGACTAAAAAAACTGTTATTGTGACGCTGGGAGATAGCACGACGGATGGTTGGAGGACTTCAAATTACACCAGCAACAACGATAATATTAATAATCTAAAAGAAGGAAATAATACATATTCTGGAATACTTAATAATATTATTAATCAACAACGTGGTTACAATTTTGATCATAAAATTTATAATCGAGGATTTTCAGGAAAAACCATTAATTGGCTTCGTCAAAATCTGGATGCTGTTCTATCTCCGATACCTGAATCCATTGATTATGCGTTCATTGCAATGGGCATCAACGATATGGTGTACGACGTGAGTAAGATTAAATCATTTCGTGACGATCATATAAATGTTATCAATCGATTGTTTGCGAAAGGCATTAAACCTGTACTAATGAGCACTCAAGCTGAATTTGAGAATTACAAACGATTTGGTTCGAAGATTAATGCGATCGCTGACAACATCAAGAAGGATTTAGCTGAAGAATTAGGATTACCATTCATTGATTATAATGCTGGTACAAGTAATATTTTGAACCATTCAGAATACAAGCTCAAGGATTTAATTCCAGACATGTGCCACTTTGGAGATCTTGGTCATCAAAAAGGGGCAGAATTCTTAGCTAGTCAGTTGATTTCTCAAACGGTATTTGTTTCAGGGGTTAGTAAAATTGGGTATCAAAATAACAAAGTGGCATCTGATTTGAATTATTCAGATTTTTTGACGGATGAACAAAAAGATGTGAAGTGGACTACTAGAACTGATGGTTTCGATTTAGAGGGTCAACTAAACTCTACTCAAACAAAGACAATGTTTGAGGTTTCGGTTTATATTGAACGTCCGTCAATTGTTCACTATTTTGGAGACAACGTGATTGTGACATCAAATGGGCGGTCATTATCAGACGGTACTGTGCTCGATGTCGGATTTTATCGAATTTCAGCTAAAAACATCCCTGGAGTTGCTAGTAAATTCCGTGGCTTGAAATTTAATATGAAAGAAGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8b464e0f98e1c32c461bce969f57740c60bc46b4908ac01c5ce126d8cd2e68bf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50