Protein

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Genbank accession
AWY02959.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MTINKNTNLEFSVQQNTEKGSVFTNFYTEDIGSASIRIRLSSDGYYINLTESDLKPSLFLFHEDGSIFEINEFVNVMPEKGLIQYNLADNVVRHAGRVNAKMFLKNSEKSVHVANFDFIIKDSGIAGAVEKEINVVVVEDTIRKIIEEESLELLGDGFKEEVLEEFKVYVVGNKEDFQGVQGEQGPPGPKGDKGDIGLTGPSGSQGPRGEQGIPGPQGATGPQGEQGLRGPQGIKGAQGDRGLQGEKGDQGIQGPKGDPGEIPNTTNWQKYKLTNDEGKYTELSLYNSDESLHGLSPGNFYATEVPINNASSTEGFVKVEKNASDLVTYITFKPTNSKEIWVKTFENDWSDWKDVSDNQKLTSIEKNIEPNFHNMNILNKIPLRFPGYDELVTSSGNTYYYPQGLALDENYLYVLYSPTGSGNTRRLVVMYDKLDNSIVTKFYAGSAGGESIHVEKEGNKTFLYAKTSAGSLGKFDISSIPVDMSELSPVQTFNIGLNYTFAKNGNEWIVEQDTPTRSAATTRELFAIYDSGLSKARRYFTVDPTVGGLWGMEYNYDTPKRQGMVALDGNLYQVSGGNYYIGNDYTTYRAQGVQLLSSNGHISKNYAYNPNELAGHLTEQGEKVTRIEHESGFVYNGKIYALVVYNFEVPNTNGADHRFCLVEYGSKTAEKTMGKSGEVIVSRNDDPYMPAIKGKLTNEYNGTPITTMKDLVKYMFNANRSEVLFYSSDVTMKDESDIDIPGGVTVRVTSAKIGIYWIEYMQNRQSRKVLLTYVGASGEYRVYNQNLEQSKSNVDLNTFLESANFYVTNSTNGPGGSAHGFVESRSTGTNAQQIFRPYNAATRYFRYYTGGAWSEWTII
Physico‐chemical
properties
protein length:859 AA
molecular weight: 95369,73020 Da
isoelectric point:5,09871
aromaticity:0,11059
hydropathy:-0,55180

Domains

Domains [InterPro]
DC_0885
STR
1–382
DC_0885 cd19958
IPR018913
ATT
5–145
IPR018913 IPR050149 DC_0539
G3DSA:2.60.40.3350
ATT
5–125
G3DSA:2.60.40.3350 IPR008160
AWY02959.1
1 859
Architecture
ATT
STR
ATT 1-145 | STR 146-857 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWY02959.1
1 859
Domain Start End Length (AA) Confidence
N-terminal 1 362 362 0,9950
Central domain 363 767 406 0,8092
C-terminal 768 859 91 0,9179
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-362
Central
363-767
C-terminal
768-859

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage VB-SauS-SA2
[NCBI] 		2234082 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY02959.1 [NCBI]
Genbank nucleotide accession
MH356730.1 [NCBI]
CDS location
range 72516 -> 75095
strand +
CDS
ATGACAATTAACAAAAACACAAATTTAGAGTTTTCCGTGCAACAAAATACCGAAAAAGGTAGCGTGTTTACTAATTTCTACACAGAAGATATAGGAAGCGCCTCTATTCGAATAAGATTATCTAGTGATGGGTATTATATCAATTTGACAGAATCAGATTTAAAACCTTCACTGTTCTTATTCCATGAAGATGGCTCTATTTTTGAAATCAATGAGTTCGTAAATGTTATGCCTGAAAAAGGTTTAATACAATACAATTTAGCAGATAACGTTGTAAGACATGCTGGACGAGTTAATGCAAAAATGTTCTTGAAAAATTCTGAGAAATCTGTACATGTTGCCAATTTTGATTTCATTATTAAAGACAGTGGTATAGCTGGTGCAGTTGAAAAAGAAATAAATGTAGTCGTAGTAGAAGATACTATTAGAAAAATCATTGAAGAAGAATCGTTAGAGTTATTAGGCGATGGCTTTAAAGAAGAAGTATTAGAAGAGTTTAAAGTATATGTAGTTGGAAACAAAGAAGATTTCCAAGGTGTTCAAGGAGAACAGGGTCCTCCAGGACCAAAGGGAGATAAAGGTGATATTGGTCTTACAGGTCCTAGTGGTTCTCAAGGTCCTAGAGGGGAACAAGGAATACCTGGACCACAGGGTGCAACTGGACCACAAGGGGAGCAAGGTTTAAGAGGTCCTCAAGGGATTAAAGGAGCACAAGGAGATAGAGGTTTACAAGGTGAAAAAGGCGACCAAGGTATCCAAGGACCTAAAGGCGACCCTGGAGAAATACCTAATACAACTAATTGGCAAAAATATAAACTTACAAATGACGAAGGTAAATATACAGAGCTATCTTTATATAATAGCGATGAATCATTACACGGTTTATCACCTGGTAATTTTTATGCTACAGAAGTCCCTATTAATAATGCAAGTTCCACAGAAGGATTTGTCAAGGTTGAAAAGAACGCTAGTGATTTAGTAACTTACATCACTTTTAAACCAACCAACTCTAAAGAGATTTGGGTTAAAACTTTTGAAAATGATTGGTCTGATTGGAAAGATGTTTCTGATAATCAAAAATTAACTAGTATTGAGAAAAACATTGAACCTAATTTCCACAACATGAATATATTAAATAAAATACCATTAAGGTTCCCTGGTTACGATGAATTAGTTACATCAAGTGGAAACACATATTACTATCCACAAGGATTAGCTTTAGATGAAAACTATCTATATGTATTGTATAGTCCTACTGGTTCAGGTAATACAAGAAGACTTGTAGTAATGTATGATAAGTTAGATAACTCTATTGTAACTAAATTCTATGCAGGCTCAGCTGGAGGAGAAAGTATCCATGTAGAAAAAGAAGGAAATAAAACTTTCTTATATGCTAAAACAAGTGCAGGGTCTTTAGGTAAGTTTGATATATCTTCAATCCCTGTTGATATGAGTGAGCTAAGTCCTGTACAAACATTTAATATTGGTCTTAACTATACATTTGCTAAGAATGGTAATGAATGGATTGTGGAACAAGATACTCCAACAAGAAGCGCTGCAACAACTCGTGAATTATTTGCTATATATGACAGTGGTTTATCTAAAGCAAGAAGATACTTTACAGTAGACCCTACTGTTGGTGGTTTATGGGGTATGGAATATAATTATGATACTCCAAAACGTCAAGGGATGGTAGCTTTAGATGGTAACTTATATCAAGTATCAGGTGGTAACTATTATATAGGAAATGATTATACTACTTATAGAGCTCAAGGTGTTCAGTTACTATCTTCTAATGGACATATATCTAAGAACTATGCTTATAACCCAAATGAGCTAGCAGGACATCTTACAGAACAAGGAGAAAAAGTAACTCGTATTGAGCATGAAAGTGGATTCGTTTACAATGGTAAAATATATGCATTAGTAGTATACAACTTTGAAGTACCAAATACAAATGGTGCAGACCATAGATTCTGTTTGGTTGAATATGGTTCAAAAACTGCTGAGAAGACAATGGGCAAATCAGGAGAGGTAATCGTAAGTAGAAATGATGACCCTTATATGCCAGCTATTAAAGGTAAATTAACAAATGAATATAATGGAACTCCTATAACTACAATGAAAGATTTAGTTAAGTACATGTTTAATGCAAACCGCTCAGAAGTATTGTTCTACTCTTCAGATGTTACAATGAAAGATGAATCGGACATTGATATACCAGGAGGAGTTACAGTAAGAGTTACATCTGCTAAGATTGGTATATATTGGATTGAATACATGCAAAATAGACAAAGTAGAAAAGTGTTATTGACTTATGTAGGAGCTTCTGGAGAATACAGAGTATACAATCAAAACTTAGAGCAATCTAAATCAAATGTAGACCTAAACACTTTCTTAGAGTCAGCTAATTTTTATGTAACAAATAGTACAAATGGACCAGGTGGTTCAGCACATGGCTTTGTAGAATCAAGAAGCACAGGAACTAATGCACAACAAATATTCAGACCTTATAATGCAGCTACTAGATACTTTAGATATTACACTGGCGGAGCTTGGTCAGAATGGACTATAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
22f4868cf1e28cbe7068a5ea11727cf019ab42c52063e9bfea7a9d1ed1dbb48a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6916
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Staphylococcus aureus phage sa2 Wang,J., Sun,H. and Ren,H. 2012-12-15 — GenBank