Protein

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Genbank accession
YP_009216881.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MIKLAEQQYFTLVTDIGKAAIANASVTGEKVDFAKIKVGDGGGSSYTPNESQTALKNVVWESTLEHAQVDKDNPNWVVIQKFIPGDVGGFEIREVGLFDSKDQLLAVSSYPTTYKPEADSGTVKELLIKVILVVSNVANINLKVDPTVILATLKDLQDLDSKIDTTKTELTNSIETTKTELNTRIDTENEKQNIKIDQLIAGGSNVASTQIITIDDWVEDAENGFKATVTHSLLTQRIVVNIIDATTKENAVTNFKIIDDNSIEVRSETRSELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKIEDRFVNLEEKVNGGLSNIATSVNELITYC
Physico‐chemical
properties
protein length:336 AA
molecular weight: 36923,92680 Da
isoelectric point:4,60932
aromaticity:0,05655
hydropathy:-0,24583

Domains

Domains [InterPro]
IPR022225
ATT
6–153
IPR022225
IPR051934
Unmapped
7–238
IPR051934
DC_0386
STR
7–334
DC_0386
YP_009216881.1
1 336
Architecture
ATT
STR
ATT 6-153 | STR 154-334 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCDHM19
[NCBI] 		1522092 Uroviricota > Caudoviricetes > Lubbockvirus >
Host Clostridium
[NCBI] 		1485 Bacteria > Firmicutes > Clostridia > Clostridiales > Clostridiaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009216881.1 [NCBI]
Genbank nucleotide accession
NC_028996.1 [NCBI]
CDS location
range 22169 -> 23179
strand +
CDS
GTGATAAAATTGGCAGAACAACAATATTTTACTCTAGTAACTGACATTGGTAAGGCAGCAATAGCAAATGCAAGTGTTACAGGTGAAAAAGTAGATTTTGCAAAGATAAAAGTTGGAGATGGAGGAGGGAGTTCTTATACTCCAAATGAGAGTCAAACAGCACTAAAAAATGTAGTTTGGGAAAGCACACTTGAACATGCACAAGTAGATAAAGACAATCCTAACTGGGTAGTAATACAAAAATTCATACCTGGCGATGTTGGAGGATTTGAAATAAGAGAAGTTGGTCTATTCGATTCCAAAGACCAATTATTAGCGGTTTCTAGTTACCCAACAACATATAAACCTGAAGCAGATTCGGGGACTGTAAAAGAACTATTAATAAAAGTAATATTAGTTGTATCTAATGTAGCTAATATAAATCTAAAAGTAGACCCTACTGTCATTCTAGCAACTTTAAAAGATTTGCAGGACCTAGACTCTAAAATTGATACAACTAAAACAGAATTAACAAACAGTATAGAAACTACTAAAACAGAGCTAAACACTAGAATTGACACAGAAAATGAGAAACAAAATATTAAAATTGACCAATTAATCGCAGGTGGTTCAAATGTGGCATCTACTCAAATAATAACAATTGATGATTGGGTTGAGGATGCAGAAAATGGATTCAAAGCAACTGTAACACATAGTTTATTAACACAGAGAATAGTTGTAAATATTATAGATGCTACTACAAAAGAAAATGCAGTTACAAACTTTAAAATTATAGATGATAATTCTATAGAAGTTAGAAGTGAAACAAGGTCAGAATTAAACGTTTATGTGATAAATGGAAATGCAGAAACTCATTTTATTAATGCAACTGTAGATGATAACAGAGTATCTGAAATGACTACTTATTCGTCTAAGAAAATCGAAGATAGATTTGTTAATCTAGAAGAAAAGGTAAATGGTGGTTTATCTAATATTGCAACTAGTGTAAATGAGTTAATAACTTATTGTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2b5a0eeb159959042ed7663fef733786cc2ec0a9151977e617d5ccf841be4786
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8627
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Abundant and diverse CRISPR spacers in Clostridium difficile strains and prophages target multiple phage types within this pathogen Hargreaves,K.R., Flores,C., Lawley,T.D. and Clokie,M.R.J. 2014-10-31 — GenBank