Protein

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Genbank accession
WZW73218.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSSINIPGFGYSAVPESPNDGQLYGRRNATWELISLSDGVLEAPADGQEYVRKDYQWVLPNYPTYNASNISLTSSLFASTNVHDALEELYYENPLNVVLVRSEDDLPAPQLINGVLTHKLEEKEYVIDGNVTIANSLGFPGAGISATIKAINRSVLTYTGTDAMFYDQGAQGSIEIAGQTEFQAPNGDMFNLISGAGGFSFQSRYADRFINCDRIGEVYCGGLSTIVFNNGTFRNFNQGLVVHDPGFFEVNTFFVFGNNQAGCTYFTLQGTSSTGSINIDTVTCSIGTNETIFNFNPNIQATIDTINVRNCSLRGPLNGTLFAPGSLTPRDFKFESLGNTLIPNTVQGGLLSLSGNATPTVVGAVNTPTLAAGTWVVQETSHFIGSTGGRLTSQVIRDISTSIDASITVEPSSGQGIVIRAYLAKNGVPIAASAKTTTADSGREGFLSLTWQMDISKDDYIELFVENRSGSTSIIVTDAALRIP
Physico‐chemical
properties
protein length:484 AA
molecular weight: 51874,12160 Da
isoelectric point:4,52634
aromaticity:0,09504
hydropathy:-0,05723

Domains

Domains [InterPro]
G3DSA:6.20.230.10
ATT
13–35
G3DSA:6.20.230.10 G3DSA:6.20.230.10
DC_0529
STR
51–484
DC_0529
WZW73218.1
1 484
Architecture
ATT
ATT
STR
ATT 13-35 | ATT 39-61 | STR 62-484
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZW73218.1
1 484
Domain Start End Length (AA) Confidence
N-terminal 1 115 115 0,8805
Central domain 116 344 230 0,9756
C-terminal 345 484 139 0,9875
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-115
Central
116-344
C-terminal
345-484

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage TCU-VP04-AIR2
[NCBI] 		3141803 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZW73218.1 [NCBI]
Genbank nucleotide accession
PP712903.1 [NCBI]
CDS location
range 27325 -> 28779
strand -
CDS
ATGTCAAGTATTAATATACCTGGCTTCGGCTACTCGGCTGTACCTGAATCGCCAAACGATGGGCAGCTATACGGTAGACGAAATGCCACATGGGAGTTAATTTCTCTCTCAGACGGTGTGCTAGAAGCACCCGCCGACGGACAAGAATATGTTCGAAAAGATTATCAATGGGTTTTGCCAAATTACCCAACTTATAACGCAAGTAATATTAGCCTAACGTCGTCGTTATTCGCGTCAACGAATGTTCACGATGCGCTTGAGGAACTTTACTACGAAAACCCACTCAATGTCGTGCTTGTTCGCAGCGAAGATGACCTGCCAGCACCGCAACTTATCAATGGTGTGTTGACGCACAAACTCGAAGAAAAGGAATATGTCATTGATGGTAATGTTACGATTGCCAATTCACTAGGGTTTCCGGGAGCGGGGATCAGTGCAACGATTAAAGCGATAAACCGTTCAGTGTTGACTTATACTGGAACCGATGCCATGTTCTACGATCAAGGTGCACAGGGTAGTATTGAAATCGCTGGCCAAACTGAGTTTCAAGCGCCGAATGGTGACATGTTCAATTTGATTTCTGGTGCAGGTGGTTTCTCATTTCAGTCACGATATGCTGACCGCTTCATTAACTGTGATCGTATAGGTGAAGTTTACTGCGGTGGATTATCTACGATTGTGTTCAATAACGGTACATTCAGAAACTTCAATCAAGGACTTGTTGTTCACGACCCGGGCTTTTTTGAAGTAAATACGTTCTTCGTATTCGGTAATAACCAAGCTGGATGCACATATTTCACATTACAAGGGACATCATCAACTGGCTCGATTAACATCGACACAGTGACATGTTCTATCGGGACAAATGAGACAATTTTCAATTTCAACCCGAATATTCAGGCAACGATTGATACGATCAACGTTCGAAACTGTAGTCTTCGTGGACCACTGAACGGTACGCTATTTGCACCGGGAAGCTTGACACCGCGTGATTTCAAATTTGAAAGTCTTGGTAACACTCTTATCCCAAATACGGTTCAGGGTGGTTTATTGTCACTATCTGGCAATGCGACCCCAACTGTAGTCGGTGCAGTAAATACTCCAACACTTGCGGCAGGTACATGGGTTGTTCAAGAAACATCACATTTCATAGGTTCAACGGGAGGTCGTTTGACTTCTCAAGTAATCAGAGATATTTCGACTAGTATTGATGCGTCAATTACGGTTGAGCCATCATCGGGTCAGGGTATTGTAATTCGCGCATACTTAGCTAAAAACGGCGTTCCAATTGCCGCTAGTGCGAAAACAACGACGGCTGATAGTGGCAGAGAGGGCTTCTTGTCATTGACATGGCAAATGGACATATCTAAAGACGATTATATCGAGTTATTTGTTGAAAACCGTTCTGGTTCAACGTCGATCATTGTCACAGATGCTGCGTTACGCATCCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
18aa9e03c5166008506ed44053bd970bd5ec97f1d8c776c3952dddef866ff683
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7965
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50