Protein

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Genbank accession
QZI78825.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,67
Protein sequence
MAVVGVPGWIGSSSVNETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGNAPIVFNITGDLVSYSRDVPLFFMYGDTPNEYVQLNIHGVTMYGRGGNGGMDSPGSAGGHCIQNDIGGRLRINNGGAIAGGGGGGGGGNRGRLVFGGGGGRPFGAPGGSIGMNTGATAGTIYAPGAGSVGNGSLSAYTGGAGGNVGAAGGRCNTHGNGAEYNGGAAGYAVIGSAPTWQNVGAIYGPRV
Physico‐chemical
properties
protein length:259 AA
molecular weight: 25906,35060 Da
isoelectric point:8,78003
aromaticity:0,08880
hydropathy:-0,16062

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_1679
STR
6–160
DC_1679
QZI78825.1
1 259
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-160 | RBD 161-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-101112UKE3-1
[NCBI] 		2865790 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI78825.1 [NCBI]
Genbank nucleotide accession
MZ234013.1 [NCBI]
CDS location
range 62765 -> 63544
strand -
CDS
ATGGCAGTAGTTGGTGTTCCCGGTTGGATTGGAAGTTCATCCGTAAATGAAACGGGTCAGCGCTGGATGAGTCAAGCGGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCACGAGAAATTATTCACACGCTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAATGCACCTATAGTGTTTAATATTACAGGTGATTTAGTATCATATTCTAGAGATGTTCCTTTATTCTTCATGTATGGAGATACACCGAATGAATATGTTCAGCTGAATATACACGGCGTAACGATGTATGGACGTGGCGGTAATGGCGGTATGGATAGTCCTGGCTCAGCTGGAGGTCATTGTATTCAAAACGATATTGGTGGGAGACTAAGAATTAATAATGGTGGAGCTATTGCAGGCGGCGGTGGCGGCGGTGGCGGCGGTAACAGGGGTCGACTAGTATTTGGCGGCGGCGGTGGGCGTCCGTTTGGTGCACCTGGCGGATCTATTGGTATGAATACAGGCGCAACCGCTGGCACCATTTACGCTCCGGGTGCAGGATCTGTCGGTAATGGGTCTCTTAGTGCATATACAGGCGGTGCGGGCGGTAACGTTGGTGCTGCTGGAGGAAGATGTAATACTCATGGTAACGGTGCAGAATATAACGGCGGAGCTGCTGGTTATGCTGTCATAGGGTCCGCTCCAACATGGCAAAATGTTGGAGCAATATACGGTCCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e87e256fc1afca87858af94bcc1c63a0c51f0e5396afd37c6b0d4988bfd4f90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8804
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Naturally bred epsilon2 phages have an improved host range and effectivity in uropathogenic E. coli over their ancestor phages Saez,D., Loose,M., Mutti,M., Visram,Z., Hitzenhammer,E., Dippel,D., Tisakova,L., Schertler,S., Wittmann,J., Corsini,L. and Wagenlehner,F. 2020-05-19 — GenBank