Protein

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Genbank accession
CFW42382.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MPVSFNSPARNLFLLGSTGDIVGNFFKTIDQSSTTDSRHIPAEIRYNESDEKYLLAGQARDVDDKDFGFFEKRDLDGIAEWDVKVESTEVGVNTTLRAMELDSNGNLIVAGKTGSIPWVAKYSNGGVIDWQSTTNTADIEYTGLAIDSNDNIYACGSTPFNGGLIGQAFVEKFDSSGTPGWGKSAFMVGRDAVLLKCSVNTRGEVVAVGYLEDDSAWKGYIVKIDTTTGNVLWDRTLSSYELTSIGDYVNLICEDVYIDNQDQIYIVGRTNNPWTPRSTRGFIVKYSAEGNIIWQKETEDNIEFYNVRSDGDTEQTIVMGGQTQDGTALSNVVLSSYAKNGDLIWRRKIVHDNRTMDSTPRAYGLDFDSSFYYIFFKETSFVFEDTYTYARVSISGNGAGNFDYNSGATNNISYDILNVGDKIGRLSDGSVRQDSSDLITYPFSANKLIFDDLATQVSNKKRQMDTADSFEYSGSPAIRPADFQELNLLGDTGFVEGPDLMPNGTFDSNIDGWVGYNSTPAWDAGRLKINAPTQNDGAETSSGVPVSPNTNYTLSFDITYGTASAFLVQVRNSSNEVFPEGNITLAGTTSGTHTIAFNSYSNTSVYVRVMSGASTGTAFFDNIKLQEVKVLDQSGKGNDGVVNGATHNAAGYWEFDGVDDYISGNTTPLANTTEGTIESWIKTTSTANPGGHIYGESLPGTSTYWAHFRLNGSVLHFVVDDNIVVAQANGSSILNDGNWHHVAVTGDGTNWTFYVDGVAETPNFIQGDGTKWFNDAPGLTHYSIGVLDRTTRSNFFDGEIGEVRIYPRALTPAQVFQNYNATREKYTGVPASIYPKLDLIVKNGLILNLDAGVSSSYPGTGTTWTDLSGNGNTGTLVNGVGYNSGNGGSLVFDGSNDYVRGETTYSPTALQPLTLSVWFYNKGQSGNRGILGIINPFSQPIGSARMIVIRSTGAVYFWGSSSDFNPTNFISEVNSWTNAVFTIDTAKKITAYKNGIFNDDATISSLNDTNALNYDVGVRSLFNEYFDGNISQVSIYNRALTAQEVLQNFNALRTRFGL
Physico‐chemical
properties
protein length:1058 AA
molecular weight: 115293,20280 Da
isoelectric point:4,53106
aromaticity:0,11531
hydropathy:-0,32353

Domains

Domains [InterPro]
DC_0902
ATT
1–494
DC_0902 IPR008979 IPR013320 G3DSA:2.60.120.200
IPR011044
ATT
88–312
IPR011044 G3DSA:2.60.120.260 G3DSA:2.60.120.200 IPR013320
PF13385
LEC
656–815
PF13385 PF13385
IPR006558
LEC
676–813
IPR006558
CFW42382.1
1 1058
Architecture
ATT
STR
STR
ATT 1-494 | STR 495-822 | STR 832-1051 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CFW42382.1
1 1058
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,5463
Central domain 83 541 460 0,8055
C-terminal 542 1058 516 0,2664
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-541
C-terminal
542-1058

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-PM2
[NCBI] 		238854 Uroviricota > Caudoviricetes > Pantevenvirales > Nodensvirus > Nodensvirus spm2
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CFW42382.1 [NCBI]
Genbank nucleotide accession
LN828717 [NCBI]
CDS location
range 118830 -> 122006
strand -
CDS
ATGCCAGTAAGTTTTAATAGTCCCGCAAGAAACCTATTCTTATTAGGTTCAACTGGAGATATTGTAGGTAATTTCTTCAAGACAATAGATCAATCATCAACTACAGATAGTAGACATATACCAGCAGAAATTAGATACAATGAATCGGATGAAAAATATCTCTTAGCAGGACAAGCAAGAGATGTAGACGATAAAGACTTTGGTTTCTTTGAAAAGAGAGATCTTGATGGCATTGCCGAGTGGGATGTAAAAGTAGAATCAACAGAAGTGGGTGTTAATACTACTCTACGTGCTATGGAATTAGATAGCAATGGTAATCTTATCGTTGCGGGAAAGACTGGTTCTATTCCTTGGGTTGCTAAGTATTCAAATGGCGGCGTTATCGATTGGCAATCAACAACAAACACAGCTGATATTGAATACACTGGTCTTGCTATCGATAGCAATGATAATATCTATGCCTGTGGTTCTACTCCATTTAATGGTGGTCTTATCGGACAAGCATTTGTAGAAAAATTTGATTCTTCTGGAACTCCTGGTTGGGGTAAGTCAGCATTTATGGTGGGAAGAGATGCTGTTCTTTTAAAGTGTTCTGTTAATACAAGGGGTGAAGTTGTTGCCGTTGGTTATTTGGAAGACGATAGTGCTTGGAAAGGATACATTGTCAAGATTGATACTACTACGGGAAATGTTTTATGGGATAGAACATTATCATCATATGAATTAACTAGTATTGGAGATTACGTTAACTTGATATGTGAAGATGTATACATCGATAATCAAGATCAAATTTATATTGTCGGTAGAACTAATAATCCATGGACTCCACGATCAACAAGAGGATTTATTGTAAAATATTCTGCGGAAGGCAATATTATATGGCAAAAAGAAACCGAAGATAATATAGAATTTTATAACGTCAGATCGGATGGAGATACAGAACAAACTATTGTAATGGGTGGTCAAACACAGGATGGAACTGCATTAAGTAACGTTGTTCTTTCTTCGTATGCTAAAAATGGAGATCTAATTTGGAGAAGAAAAATAGTTCATGATAATAGAACTATGGATTCCACTCCAAGAGCATATGGTCTTGATTTTGACTCATCATTTTATTATATATTTTTTAAAGAGACTTCATTTGTTTTTGAAGATACTTACACTTATGCCAGAGTAAGTATTTCTGGTAATGGTGCTGGAAACTTTGACTATAATTCTGGTGCTACCAATAATATAAGCTATGACATCCTTAATGTTGGAGATAAGATTGGTAGATTATCTGATGGTTCTGTAAGACAAGACAGCAGTGATCTCATCACCTATCCATTCAGTGCTAACAAACTAATCTTTGATGATCTTGCCACTCAGGTATCAAACAAGAAGCGTCAGATGGATACTGCCGATAGCTTTGAGTATAGTGGTAGTCCTGCTATTAGACCTGCTGACTTCCAAGAGTTGAACCTGTTGGGTGATACTGGATTTGTAGAAGGACCTGATTTGATGCCTAACGGAACCTTTGATAGTAATATCGATGGGTGGGTTGGGTATAACTCTACTCCCGCATGGGATGCTGGTAGATTGAAGATTAATGCTCCTACACAAAATGATGGAGCAGAAACAAGCTCTGGGGTTCCTGTATCTCCCAATACAAATTACACATTAAGTTTTGATATTACATATGGGACAGCTTCAGCATTTTTAGTTCAAGTTAGGAACTCATCTAACGAAGTTTTTCCAGAAGGAAATATAACACTGGCAGGGACTACTTCTGGTACTCACACAATTGCTTTTAATAGCTACTCCAACACATCCGTTTATGTTCGTGTGATGTCTGGAGCCTCAACTGGAACAGCATTTTTTGATAACATAAAACTTCAGGAAGTAAAAGTATTAGACCAATCGGGCAAAGGTAATGATGGTGTAGTGAATGGTGCCACCCACAACGCCGCTGGATACTGGGAGTTTGATGGGGTGGATGATTATATTTCAGGCAATACAACGCCATTAGCAAACACAACTGAAGGAACTATTGAATCTTGGATCAAAACTACATCTACTGCTAATCCTGGGGGACACATCTATGGAGAAAGTTTGCCAGGGACTTCTACATATTGGGCTCACTTTAGATTAAATGGATCTGTTCTTCATTTTGTTGTAGATGACAATATCGTAGTCGCTCAAGCAAATGGATCTTCTATATTGAATGATGGAAACTGGCATCATGTTGCTGTCACTGGTGACGGAACTAACTGGACTTTCTATGTTGATGGTGTAGCAGAAACTCCAAATTTTATTCAAGGTGATGGAACTAAATGGTTCAACGATGCTCCTGGTTTGACACATTATTCTATTGGAGTTTTAGATAGAACAACCAGAAGTAATTTCTTTGATGGGGAAATTGGAGAAGTTCGTATCTATCCAAGAGCACTAACACCAGCACAAGTATTCCAGAACTACAACGCCACCCGTGAAAAATATACTGGTGTTCCAGCAAGTATATATCCAAAACTCGATCTAATCGTAAAAAATGGATTGATATTAAATCTTGATGCTGGTGTCTCAAGTTCTTATCCTGGAACAGGAACCACTTGGACTGATTTGAGTGGTAATGGGAATACTGGAACTCTTGTGAATGGTGTTGGGTATAATAGTGGTAATGGGGGTTCTTTGGTTTTTGATGGGTCAAACGATTATGTAAGAGGTGAGACGACATATTCCCCAACGGCATTGCAACCATTAACATTGTCTGTTTGGTTTTATAATAAAGGACAATCTGGCAATCGAGGAATACTTGGTATTATTAATCCATTTAGTCAACCAATTGGTTCTGCTAGAATGATTGTTATACGATCTACAGGTGCAGTTTATTTTTGGGGAAGTTCATCTGATTTTAATCCAACAAATTTTATATCTGAAGTAAATTCTTGGACCAACGCAGTTTTTACTATTGATACAGCAAAAAAAATAACCGCTTATAAAAACGGAATATTTAATGACGATGCTACTATATCGTCATTAAATGATACAAATGCACTAAATTATGATGTTGGAGTTAGAAGTCTTTTTAATGAATATTTTGACGGAAACATCTCCCAAGTCTCAATATACAACAGAGCACTCACCGCCCAAGAAGTTCTCCAAAATTTCAATGCACTTCGAACAAGATTTGGATTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2934f8825b55955da2c2e17e25b30580311e3c45bfa9e8fe76ee46a2afff61c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7611
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50