Protein

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Genbank accession
YAO56713.1 [GenBank]
Protein name
distal tail protein Dit
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVFQFNGYDLNDYFKLIKVSHEIGNERDITIDSAPKIGVNVQQVSFGAKKIKLTVSLATRDLADMTFIDPNEPAPIDYNMFHHVREQAARVLHSDKPVELKLPDEPDRYYLAIVTGEASLKGISDWYDQAEIEFLVPDGVAHSTTYRSFENPKSVNEKLVFDLVNDGSVEAHPIITVKHNSENGYIGLVNSTGVCELGDRLEANTEDYRHSEVLFDYASSNGEHRIPNGLSQGLKNVGISNDVNDTKPNGTLYIDNAWGRPHIALQSGQVSSVTFDIPMDSSGEKGALYEYLWWRQIFWIGSANQMGYLKICVTDASGTFLYGVETLKRYNGLGCEYNFLAADGKGGFRIVDKKNFLGTHIEQHNPFNEPRGWSDIMRFDDVVQFYWWGSYPRYSIPEIKGKRSDKIHVIFGRIGNYPPVTHMYLDDFIYRKDYVLGVRDIPNRYRAGGEVVIDSETDTVTVDNIPKIVDVVQGSDFLTIPPGKSQLEVYCSSWVTTKPSVYVQFEERYI
Physico‐chemical
properties
protein length:511 AA
molecular weight: 57818,16790 Da
isoelectric point:5,15714
aromaticity:0,11742
hydropathy:-0,37671

Domains

Domains [InterPro]
DC_0077
STR
1–511
DC_0077
G3DSA:2.40.30.200
ATT
2–143
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
14–137
IPR008841
IPR006520
Unmapped
83–143
IPR006520
YAO56713.1
1 511
Architecture
ATT
STR
ATT 1-143 | STR 144-511
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAO56713.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,8762
Central domain 204 402 200 0,1956
C-terminal 403 511 108 0,5874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-402
C-terminal
403-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage ALQ-A
[NCBI] 		3462926 Viruses > unclassified bacterial viruses >
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO56713.1 [NCBI]
Genbank nucleotide accession
PX240008 [NCBI]
CDS location
range 15938 -> 17473
strand +
CDS
ATGGCCGTGTTTCAATTTAACGGATATGATTTGAATGATTACTTCAAATTAATCAAAGTGTCGCACGAAATTGGGAATGAACGCGATATCACTATAGACTCAGCCCCTAAAATTGGGGTTAATGTTCAACAAGTTTCGTTTGGTGCTAAAAAAATAAAATTAACTGTCAGCTTAGCGACTAGAGACTTGGCTGATATGACATTTATTGACCCAAACGAACCAGCTCCAATTGATTACAACATGTTTCATCACGTAAGGGAACAAGCGGCTAGAGTGCTACACTCTGATAAACCGGTAGAATTGAAATTACCTGATGAGCCAGATAGGTACTATTTAGCGATAGTGACAGGAGAAGCTAGTTTGAAAGGTATCTCTGACTGGTATGACCAGGCTGAAATTGAATTCTTAGTACCTGACGGTGTTGCACATTCAACCACTTACCGAAGTTTCGAAAACCCCAAATCGGTAAATGAAAAGCTAGTATTTGACCTTGTTAATGACGGGTCAGTTGAAGCTCATCCAATAATTACAGTGAAGCACAATAGTGAGAATGGCTATATTGGATTAGTTAATAGCACAGGTGTCTGTGAGCTTGGGGACAGGTTAGAAGCAAATACAGAAGATTATAGACATTCAGAGGTACTTTTTGATTACGCTTCGTCAAACGGGGAGCACAGAATCCCTAACGGTTTATCTCAAGGATTGAAAAACGTTGGCATCTCAAACGATGTCAACGACACCAAGCCAAACGGCACTCTTTACATTGATAATGCTTGGGGACGACCTCACATTGCTTTGCAGAGCGGTCAAGTATCATCGGTTACTTTTGACATACCAATGGATTCTAGCGGTGAAAAAGGTGCGCTATATGAATACCTTTGGTGGAGACAAATTTTTTGGATTGGTTCTGCAAACCAAATGGGATACTTAAAAATCTGTGTCACAGATGCAAGTGGCACTTTTCTCTATGGTGTCGAAACTCTTAAACGTTACAATGGTTTAGGCTGTGAATATAATTTTCTAGCTGCTGACGGCAAGGGAGGTTTCCGTATTGTCGACAAGAAGAATTTTTTAGGCACACACATCGAGCAGCACAACCCATTTAATGAACCAAGGGGTTGGTCAGATATAATGAGGTTTGATGATGTCGTCCAATTTTATTGGTGGGGGTCATACCCAAGATATTCTATCCCCGAAATCAAGGGGAAAAGATCAGATAAAATCCATGTTATTTTTGGAAGGATTGGTAATTATCCACCTGTTACCCACATGTATCTCGATGATTTTATTTATCGAAAAGACTACGTCTTAGGTGTCAGGGATATTCCTAATAGATACCGTGCTGGTGGGGAAGTGGTAATAGATAGTGAAACTGATACCGTCACTGTAGATAATATTCCAAAGATTGTCGATGTTGTGCAAGGCTCTGACTTCCTCACGATTCCTCCTGGTAAGTCGCAGCTAGAAGTCTACTGTTCAAGCTGGGTAACAACTAAACCATCCGTATATGTTCAATTTGAGGAGAGATATATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d3d6cbc149a2acee6c8b444b899770ee71cecd0cf8b35fdfac46eb52fd0661a7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8826
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Temporal dynamics of the S. thermophilus phage population in a yogurt production facility Pujato,S.A., Marangon,A., Lugli,G.A., Ventura,M., Mahony,J., Andrea,Q. and Daniela,G.M. 2025 — GenBank