Protein

View in Explore

Genbank accession

AFU88392.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,51

Protein sequence

MVDIVAGTPVSVSYSGASTTYVAAETGLMTVHLWGGAGAGGYYANGAGNPNKYGGAGGYATLNFLVQEGDVLTIEVGQGGQVPTGSGTTVTAGGSGGWPDGGYGGKSTSAWVGLGGGGGSTRLYRNGELIGVAGGGGGATGFYHGGNGGGMVGLASADASSGAGGTQSAGGTAGSGTLAIQTGLGFQGGRGGATASTAHAYAGGGGGGGLYGGASNGGGSGAHGSGGGGSGYINQNLLYSGRLQAGRIDALGVPFDVAGIRPAGVAEGGTGPTVASTGWGSITPGGDGFAYLSLTSVASATAFPTSGTTTLAYSGSRQVYTVTQLSTVDIEMWGGGGGGGFYTSGGASPRYGGAGGYTKFTKVLFPGDIVEIEVGQGGQAPTGVGGNIGGFGGWPNGGDGGRSSVNSATNMGGGGGSTNIYVNGRLLGVASGGGGSTGFYNGGNGGGKWGLADAAAASGTAGTWARDNSTGTGLGRGFFLRGGHGSPNESRDVAHPNAGAGGGGGYWGGGGARGGSGTHGAGGGGCGFINGDLTWNRDYQWGTQGTGQPYTGGAYTSGVAVGGTSGNTAGSTTNGGDGQIVFTVTAASTTTLPSDKNALTYSGAVQHYVVPTAGVIDLKMWGSGGGSAVRSTGTPGRGGGGGCTQVPFIPIKPGDIVTFAVGQGGRGAVDANSISPGGWPNGGYSGPSASAGGGGASLCYLNGELVAVAGSGAGAGISNGGFAGGAASCDPGYVNFTSHGGTQTTAGWCPTRVLEGTTYGTYMLGGDGQIDGVAPNNVNVNTGGGGGGGYYGGGGNATNSSRYWGGGGGSGYINPKFAGTIIGATSVNAANNTDPDYVAGVGVAGVGSTTYANPVTNGGDGRIVFTYDTPPNLVESLTTAVPVDGAVKTYIVGADGDLVLDLWGGGGGAATILGGGGSERGGGGGYVGGTYPVTAGQVIRFYNGRGGGGGVYTSGTATALVGTGGPSGWPDGGAGGYYAGAGSNGILAGAGGGSSRVYVDDQLILVAGGGGGGGAGTTTTTPGGGGGSTGGDSDAPAGRNFGATQARGGYNSNRPTDTVSSGGLFRGGAGYLSGGSSSISAQSAGGGGGGGLFGGGGSGSSVTYIGGSGGSGFIFDGLVVSKKDPYRADVIAQMSFESGAVVADGRVCEIQPIDTPPTAVTTSPKYGAYCGNYPGSGHSTMPVPAFGLQNFTIEAWFNPSSLGNGVLFAYGNSGVGGFSLHYASTTLYLRHNGDAATDVTWADTGRTANVWAHYAVVRDMAGTRVYKDGRLVMSYANSIGTTFTATQLTLANYTGASGASTRFSGRIDEFRATLGACRYVKPFVPSSFAAPLSTPLPTLTTITQAPQGSSGNAANNTDTNYIAGRGVGAQTRQTAGTAPSGGDGQISYFIATSTISASGPIGTVTVSGLTDAAAGAFYPLPGVGSVVVEPYTGARVNYEVTEAVGARIKVEMWGGGGGGSSANTALTTNGGGGGGYTVIELDLVQGDRITVQTPSGGAGGVNAGSGSAINLGGYPDGGDGYRPAFTALNCGGGGSARLWAQGNLAAVAGGGGGAAYGGGGYDFPGGAGGGNLGGPGAYDGVNAPFPNGGGTQIAGGAGTANGFNGASLQGGHGGVTPSVANNGCGGGGGYYGGGGGGAYKAGGGGSGYVNTGLPGYRTGSTTGGSGNLPAGMSSPNYVSGIGVGSNGKGGAFTNGGNGRIVISVITPTPGNASGSIGTVNVSGLDEFGLLIGVPTGDLDTIDVVVPVGQSGQPGFAEGPLTTIGVGPAETIPQAQAVVIVPINDQTSILIEPPINAPLEVPGEGIGELDTILVSPFDSTQTAGVAFDAADVPTITLVAPEAEAVEIPPVLTSGDIGTVIVTAPEATTQVIPPVETSGDIGTITVVTVTGEASWNNNVSASGDIGTIIVTVPDVVAVGDDLAEGLIGTITVIAPEGVALQDANVAADIGTISVYPIEGGQPGDAVGDIPYIQVVTPGATVNASSGDDISLYADIGTIYVLQVYGQGFWISEDNYVHALPDPLIVTTTAPEGSARGDVHIVQVLPTIVVTPPAPAATGEGFVDGYTGDFIILVDPPVPLTELNANVNVAMPPPIVINGNDAETSLDVTIPFSDTAVFVSGPEALGLGFHGGEMGPPILVTPPEGGPEISVEIFVDPGTILVEAPRFHYIPPITVLPPEGVALDAHSAEASGDLGTITIGVPTGGYQANVAINLPLPTIFVNVPQVVVFASVAVSGDVGTITLTPPDATLTAGVDASFALPGPIVVSTPEATATAGSSAATSGALGTITITPPEGLVSTGTAAATSGAIGTIVVSPFDGSVFISYPGNASGAIGTIIVTPPAASLTHGHDLSIALPGPIIITAPEAQPQAGATVSGDIGTIIVTPLDGHATGDTVLASGDIGTIVVSTPDGEATGRGLGSGAIGTIVITPPAATLTAEANKAVALPGPIIVTPLTGVGQVPAAAAGDLATITITSVPEATLSIGQDISGQIGTITVTPPEAFPQGSVFVDPTDEMVVQLLPPQAILFQEATVIVGFPTVYLIAPEAITYSLAEFASITLLPPDAYVDVPLPLGKNRIRYRRNNTAGLAPTSLRPNEIALNETDGLLFTRDGSGAVKATPLGFLTGAGVPPPVTDNGKVLSGGLSWETPNTRYLLPVRNAPPAGTRIALGEGVVGVTTFTPTVDVTYTRPFFVAKTIDIQALSVDVVGAAAATAELGLIGWSLSGVPGATLALGTVSTATTGIKTATGTAVTLTPGWYASTFKVTGAAGAAFRAPTAPTAIAPDFTVTPGAPAPVMADLEA

Physico‐chemical properties

protein length:	2797 AA
molecular weight:	270901,52930 Da
isoelectric point:	4,38993
aromaticity:	0,07079
hydropathy:	0,11809

Domains

Domains [InterPro]

DC_0450
STR
3–306

DC_0450 DC_0450 IPR013320 DC_0450 DC_0450

IPR055163
STR
25–237

IPR055163 DC_0450 IPR055163 DC_0450 IPR055163 DC_0450

PF13385
LEC
1176–1311

PF13385

G3DSA:2.60.120.200
STR
1178–1312

G3DSA:2.60.120.200

AFU88392.1

1 2797

Architecture

STR

STR 3-1312 | STR 1315-2797

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0450	STR	DC_0450	3	306	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
IPR055163	STR	DC_0678	25	237	InterPro cluster	ALK/LTK-like, glycine-rich domain	Central	Low	Positional only	4 proteins / 4 hits
DC_0450	STR	DC_0450	296	592	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
DC_0450	STR	DC_0450	584	885	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
IPR055163	STR	DC_0678	613	862	InterPro cluster	ALK/LTK-like, glycine-rich domain	Central	Low	Positional only	4 proteins / 4 hits
DC_0450	STR	DC_0450	878	1286	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
IPR013320	STR	IPR013320	1128	1311	Merged direct domain	Concanavalin A-like lectin/glucanase domain superfamily	Central	Low	Positional only	237 proteins / 237 hits
PF13385	LEC	DC_0004	1176	1311	InterPro cluster	PF13385	C-terminal	Medium	Text match	334 proteins / 417 hits
G3DSA:2.60.120.200	STR	G3DSA:2.60.120.200	1178	1312	Merged direct domain	G3DSA:2.60.120.200	Central	Low	Positional only	153 proteins / 153 hits
DC_0450	STR	DC_0450	1315	1771	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
IPR055163	STR	DC_0678	1449	1704	InterPro cluster	ALK/LTK-like, glycine-rich domain	Central	Low	Positional only	4 proteins / 4 hits
DC_0450	STR	DC_0450	1736	1950	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits
DC_0450	STR	DC_0450	1938	2797	Novel HMM	DC_0450	Central	Low	Positional only	24 proteins / 24 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Caulobacter phage CcrSwift [NCBI]	2927984	Uroviricota > Caudoviricetes > Jeanschmidtviridae > Shapirovirus swift >
Host	Caulobacter crescentus [NCBI]	155892	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

5c13a9f32bf4fc73a507d493f8bd3abbae187a3dfb2c993971f4efd0be30adaf

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,4175

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence